RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 LRRN3E7EW58 273 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 PLPP3O14495 311 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 LYPD3O95274 346 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 CH25HO95992 272 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 HIST1H2ABP04908 130 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 ADORA3P0DMS8 318 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 COX4I1P13073 169 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 TTKP33981 857 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 CDKN1AP38936 164 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 FABP6P51161 128 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 TAS2R41P59536 307 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 ARF1P84077 181 aaKnown RBP13.39□□□□□ -0.27
NUP50-204ENST00000417702 ETFDHQ16134 617 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 LRRC23Q53EV4 343 aaPredicted RBP13.39□□□□□ -0.27
NUP50-204ENST00000417702 CARD17Q5XLA6 110 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 WDR88Q6ZMY6 472 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 DEF8Q6ZN54 512 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 HIST3H2AQ7L7L0 130 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 PXKQ7Z7A4 578 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 HIST1H2ACQ93077 130 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 CMTM5Q96DZ9 223 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 COX4I2Q96KJ9 171 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 CRLF2Q9HC73 371 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 B3GAT2Q9NPZ5 323 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 NANSQ9NR45 359 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 USP22Q9UPT9 525 aa13.39□□□□□ -0.27
NUP50-204ENST00000417702 ARPC4-TTLL3A0A0A6YYG9 625 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 ELOVL7A1L3X0 281 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 TRIM64A6NGJ6 449 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 TRIM64BA6NI03 449 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 C11orf98E9PRG8 122 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 M0R3G1 203 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 KPNA4O00629 521 aaPredicted RBP13.38□□□□□ -0.27
NUP50-204ENST00000417702 SMAD7O15105 426 aaKnown RBP13.38□□□□□ -0.27
NUP50-204ENST00000417702 SHOX2O60902 331 aaPredicted RBP13.38□□□□□ -0.27
NUP50-204ENST00000417702 SERPINI2O75830 405 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 DCTN3O75935 186 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 FAM107AO95990 144 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 CD8AP01732 235 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 THY1P04216 161 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 KDELR2P33947 212 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 ZNF74Q16587 644 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 CEACAM16Q2WEN9 425 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 CYBRD1Q53TN4 286 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 GKAP1Q5VSY0 366 aaPredicted RBP13.38□□□□□ -0.27
NUP50-204ENST00000417702 ZNF544Q6NX49 715 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 TREML1Q86YW5 311 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 C20orf196Q8IYI0 205 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 MICU2Q8IYU8 434 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 TMEM123Q8N131 208 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 MUC15Q8N387 334 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 OR6N1Q8NGY5 312 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 TXNDC15Q96J42 360 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 LRR1Q96L50 414 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 HS6ST2Q96MM7 605 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 SLC38A2Q96QD8 506 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 EMC6Q9BV81 110 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 POLR2J2Q9GZM3 115 aaKnown RBP13.38□□□□□ -0.27
NUP50-204ENST00000417702 POLR2J3Q9H1A7 115 aaKnown RBP13.38□□□□□ -0.27
NUP50-204ENST00000417702 EFCAB1Q9HAE3 211 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 CBLN4Q9NTU7 201 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 MED29Q9NX70 200 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 NAV3Q8IVL0 2385 aa13.38□□□□□ -0.27
NUP50-204ENST00000417702 SLC35F4A4IF30 521 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 ATP6V1G2-DDX39BF2Z307 99 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 OR5F1O95221 314 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 UMPSP11172 480 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 TNFRSF1BP20333 461 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 PRDX6P30041 224 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 CLEC12BQ2HXU8 276 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 CLEC9AQ6UXN8 241 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 B3GLCTQ6Y288 498 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
NUP50-204ENST00000417702 CCDC36Q8IYA8 594 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 CIARTQ8N365 385 aaPredicted RBP13.37□□□□□ -0.27
NUP50-204ENST00000417702 ANKS4BQ8N8V4 417 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 LZICQ8WZA0 190 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 TPD52L3Q96J77 140 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 ADAD1Q96M93 576 aaKnown RBP13.37□□□□□ -0.27
NUP50-204ENST00000417702 LRRC37BQ96QE4 947 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 SMR3AQ99954 134 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 HOPXQ9BPY8 73 aaPredicted RBP13.37□□□□□ -0.27
NUP50-204ENST00000417702 ZNF426Q9BUY5 554 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 BARX1Q9HBU1 254 aaPredicted RBP13.37□□□□□ -0.27
NUP50-204ENST00000417702 CMTM6Q9NX76 183 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 ZNF229Q9UJW7 825 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 MOKQ9UQ07 419 aa13.37□□□□□ -0.27
NUP50-204ENST00000417702 TLN2Q9Y4G6 2542 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 ZNF99A8MXY4 864 aaPredicted RBP13.36□□□□□ -0.27
NUP50-204ENST00000417702 NDUFAB1O14561 156 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 GSTA4O15217 222 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 RNF13O43567 381 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 CRYAAP02489 173 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 BMP4P12644 408 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 IFNGR1P15260 489 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 APOBEC3AP31941 199 aaPredicted RBP13.36□□□□□ -0.27
NUP50-204ENST00000417702 IFNA8P32881 189 aa13.36□□□□□ -0.27
NUP50-204ENST00000417702 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms