RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FAM83EQ2M2I3 478 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SPANXN2Q5MJ10 180 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 AVPI1Q5T686 147 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM69AQ5T7M9 428 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 C1orf185Q5T7R7 199 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ABHD17BQ5VST6 288 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ANKRD22Q5VYY1 191 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 DHRS7BQ6IAN0 325 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 FBXO42Q6P3S6 717 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 HACD2Q6Y1H2 254 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ZBTB49Q6ZSB9 765 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM183BPQ6ZVS7 135 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM17Q86X19 198 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 AQP12AQ8IXF9 295 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 DHRSXQ8N5I4 330 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 RFLNBQ8N5W9 214 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 YIPF7Q8N8F6 280 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM104Q8NE00 496 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 DNAAF1Q8NEP3 725 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 CLEC4CQ8WTT0 213 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SLC20A1Q8WUM9 679 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 C22orf15Q8WYQ4 148 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 RIT1Q92963 219 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM203Q969S6 136 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 BOD1Q96IK1 185 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ADAD1Q96M93 576 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 Q96MT0 163 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 LINC00052Q96N35 136 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 CD180Q99467 661 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 NAT9Q9BTE0 207 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 NT5DC2Q9H857 520 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 NOL11Q9H8H0 719 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 RNF121Q9H920 327 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 C3orf14Q9HBI5 128 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 IL1RAPQ9NPH3 570 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 POLE4Q9NR33 117 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 KRT84Q9NSB2 600 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SMPD3Q9NY59 655 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 RDH8Q9NYR8 311 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TAS2R14Q9NYV8 317 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 DNAJB11Q9UBS4 358 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 SEC14L4Q9UDX3 406 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 TBC1D24Q9ULP9 559 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 KCNK6Q9Y257 313 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 ANK3Q12955 4377 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 USF3Q68DE3 2245 aa4.95□□□□□ -1.62
ECHDC1-206ENST00000417628 CXorf51AA0A1B0GTR3 108 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ATP6AP2A0A1C7CYW4 349 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 XKRY2A2RUG3 117 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 E7EQ34 232 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 NPIPA2E9PIF3 369 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 POC1B-GALNT4F8VUJ3 575 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CYR61O00622 381 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 HSPA12AO43301 675 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 KLRC4O43908 158 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ACTL6BO94805 426 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 WDR47O94967 919 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CD160O95971 181 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 IGSF6O95976 241 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 HPP00738 406 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 GUSBP08236 651 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 OR56A5P0C7T3 313 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ANXA7P20073 488 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 UQCRC2P22695 453 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 FPR3P25089 353 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ZFP36P26651 326 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TEAD1P28347 426 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 OR1E1P30953 314 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 PTGER1P34995 402 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 MAGEA6P43360 314 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 OMPP47874 163 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TGM4P49221 684 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ARSEP51690 589 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CEBPGP53567 150 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CDH13P55290 713 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CXCR4P61073 352 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 RAP1BP61224 184 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 RRAS2P62070 204 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 DCDP81605 110 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 DHODHQ02127 395 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 SCN1BQ07699 218 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TSPAN31Q12999 210 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TRAF3Q13114 568 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TP53BP2Q13625 1128 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 EXOSC2Q13868 293 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 KRT33BQ14525 404 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 PTGR1Q14914 329 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 P2RY14Q15391 338 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 SIX1Q15475 284 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TATDN3Q17R31 274 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CLEC12BQ2HXU8 276 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF789Q5FWF6 425 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ARMC12Q5T9G4 340 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 NXNL2Q5VZ03 156 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 FRMPD2BQ6IN97 320 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 KLHL17Q6TDP4 642 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 METAP1DQ6UB28 335 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 UQCC3Q6UW78 93 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms