RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PNMTP11086 282 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 ATP6V1B2P21281 511 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 CFPP27918 469 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 NTF4P34130 210 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 LSM11P83369 360 aaKnown RBP eCLIP15.76■□□□□ 0.11
VCP-202ENST00000417448 MS4A2Q01362 244 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 IFI44LQ53G44 452 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 OTUD3Q5T2D3 398 aaPredicted RBP15.76■□□□□ 0.11
VCP-202ENST00000417448 ZNF613Q6PF04 617 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 CLEC2AQ6UVW9 174 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 LINC00114Q6XXX2 140 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 MEX3DQ86XN8 651 aaKnown RBP15.76■□□□□ 0.11
VCP-202ENST00000417448 C10orf53Q8N6V4 93 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 LZICQ8WZA0 190 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 SLC7A6OSQ96CW6 309 aaPredicted RBP15.76■□□□□ 0.11
VCP-202ENST00000417448 C1orf159Q96HA4 380 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 MOGAT1Q96PD6 335 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 THTPAQ9BU02 230 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 TAPBPLQ9BX59 468 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 EVA1AQ9H8M9 152 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 CHODLQ9H9P2 273 aa15.76■□□□□ 0.11
VCP-202ENST00000417448 DCAF13Q9NV06 445 aaKnown RBP15.76■□□□□ 0.11
VCP-202ENST00000417448 CISD1Q9NZ45 108 aaKnown RBP15.76■□□□□ 0.11
VCP-202ENST00000417448 ZNF716A6NP11 495 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 FTCDNL1E5RQL4 147 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 hCG_2039718K7EN88 272 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 FFAR1O14842 300 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 CHP2O43745 196 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 GMNNO75496 209 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 YES1P07947 543 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 FKBP2P26885 142 aaKnown RBP15.75■□□□□ 0.11
VCP-202ENST00000417448 GRPRP30550 384 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 H3F3AP84243 136 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 RNPS1Q15287 305 aaKnown RBP15.75■□□□□ 0.11
VCP-202ENST00000417448 TMEM201Q5SNT2 666 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 GTF2IRD2BQ6EKJ0 949 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 ABLIM2Q6H8Q1 611 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 GTF2IRD2Q86UP8 949 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 GABRG1Q8N1C3 465 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 STEAP2Q8NFT2 490 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 TMEM255BQ8WV15 326 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 ZHX1-C8orf76Q96EF9 292 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 NAA11Q9BSU3 229 aaPredicted RBP15.75■□□□□ 0.11
VCP-202ENST00000417448 CACNG6Q9BXT2 260 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 C12orf10Q9HB07 376 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 FANCFQ9NPI8 374 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 A4GNTQ9UNA3 340 aa15.75■□□□□ 0.11
VCP-202ENST00000417448 TRAV36DV7A0A075B6V5 113 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 SHISA9B4DS77 424 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 PIP5K1CO60331 668 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 IGHV3-9P01782 118 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 BGLAPP02818 100 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 IFNW1P05000 195 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 SLC25A16P16260 332 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 P2RY4P51582 365 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 MAP2K6P52564 334 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 UGT2B15P54855 530 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 DSCR9P59020 149 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 FXNQ16595 210 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 C11orf71Q6IPW1 123 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 GPAT4Q86UL3 456 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 STK32CQ86UX6 486 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 SLC43A2Q8N370 569 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 PFN4Q8NHR9 129 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 GEMIN6Q8WXD5 167 aaKnown RBP15.74■□□□□ 0.11
VCP-202ENST00000417448 CCDC124Q96CT7 223 aaKnown RBP15.74■□□□□ 0.11
VCP-202ENST00000417448 NSMCE2Q96MF7 247 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 GORASP2Q9H8Y8 452 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 PRSS50Q9UI38 385 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 RPS6KA6Q9UK32 745 aa15.74■□□□□ 0.11
VCP-202ENST00000417448 M0R082 166 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 GYG2O15488 501 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 CH25HO95992 272 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 LIPNQ5VXI9 398 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 TTC33Q6PID6 262 aaPredicted RBP15.73■□□□□ 0.11
VCP-202ENST00000417448 PAQR6Q6TCH4 344 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 LRRC17Q8N6Y2 441 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 MFSD8Q8NHS3 518 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 ZNF417Q8TAU3 575 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 ZNF587Q96SQ5 575 aaPredicted RBP15.73■□□□□ 0.11
VCP-202ENST00000417448 NGBQ9NPG2 151 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 MEPEQ9NQ76 525 aaPredicted RBP15.73■□□□□ 0.11
VCP-202ENST00000417448 GLRX2Q9NS18 164 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 KLHL9Q9P2J3 617 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 MAGEL2Q9UJ55 1249 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 PRDM4Q9UKN5 801 aa15.73■□□□□ 0.11
VCP-202ENST00000417448 AQP7P3A6NL99 342 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 EIF1BO60739 113 aaKnown RBP15.72■□□□□ 0.11
VCP-202ENST00000417448 OR5F1O95221 314 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 CDH11P55287 796 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 IL1RL1Q01638 556 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 BNIP1Q12981 228 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 SFRP5Q5T4F7 317 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 TMEM225Q6GV28 225 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 TBPL2Q6SJ96 375 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.72■□□□□ 0.11
VCP-202ENST00000417448 ZIC4Q8N9L1 334 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 PIGXQ8TBF5 258 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 C10orf105Q8TEF2 133 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 HSD17B8Q92506 261 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms