RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CKAP2Q8WWK9 683 aa12.8□□□□□ -0.36
RPS28-201ENST00000417088 SLC41A3Q96GZ6 507 aa12.8□□□□□ -0.36
RPS28-201ENST00000417088 NOX3Q9HBY0 568 aa12.8□□□□□ -0.36
RPS28-201ENST00000417088 DYNLRB1Q9NP97 96 aa12.8□□□□□ -0.36
RPS28-201ENST00000417088 B3GNT2Q9NY97 397 aa12.8□□□□□ -0.36
RPS28-201ENST00000417088 USP22Q9UPT9 525 aa12.8□□□□□ -0.36
RPS28-201ENST00000417088 A0A087WUJ7 227 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 TPST1O60507 370 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 HLA-HP01893 362 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 ADRA2AP08913 450 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 APEX1P27695 318 aaKnown RBP12.79□□□□□ -0.36
RPS28-201ENST00000417088 CAPZA2P47755 286 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 SNTB2Q13425 540 aaKnown RBP12.79□□□□□ -0.36
RPS28-201ENST00000417088 RIN1Q13671 783 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 DAG1Q14118 895 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 MSMPQ1L6U9 139 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 GLIPR1L2Q4G1C9 344 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 ALG10BQ5I7T1 473 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 CARD17Q5XLA6 110 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 KRT80Q6KB66 452 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 ULK3Q6PHR2 472 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 EPGNQ6UW88 154 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 NHLRC1Q6VVB1 395 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 GOLGA6L1Q8N7Z2 621 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 OR6S1Q8NH40 331 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 UBASH3BQ8TF42 649 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 HPS1Q92902 700 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 MS4A3Q96HJ5 214 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 SNX18Q96RF0 628 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 EMC6Q9BV81 110 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 SLAMF8Q9P0V8 285 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 CMAHPQ9Y471 501 aa12.79□□□□□ -0.36
RPS28-201ENST00000417088 LYNX1G3V0Z9 82 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 LYNX1P0DP58 116 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 ARAFP10398 606 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 IFNGR1P15260 489 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 NQO1P15559 274 aaKnown RBP12.78□□□□□ -0.36
RPS28-201ENST00000417088 NR4A1P22736 598 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 MRPL19P49406 292 aaKnown RBP12.78□□□□□ -0.36
RPS28-201ENST00000417088 MAGOHP61326 146 aaKnown RBP12.78□□□□□ -0.36
RPS28-201ENST00000417088 CDK6Q00534 326 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 POU3F1Q03052 451 aaPredicted RBP12.78□□□□□ -0.36
RPS28-201ENST00000417088 MFSD13AQ14CX5 517 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 TRIP10Q15642 601 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 GSG1Q2KHT4 349 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 LRIF1Q5T3J3 769 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 GCNT6Q5T4J0 391 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 LIPNQ5VXI9 398 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 FAM91A1Q658Y4 838 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 FUNDC1Q8IVP5 155 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 UEVLDQ8IX04 471 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 LINC01356Q8N9X3 169 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 C1orf159Q96HA4 380 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 TXNDC15Q96J42 360 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 LRR1Q96L50 414 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 ZNF75AQ96N20 296 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 TPK1Q9H3S4 243 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 MED29Q9NX70 200 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 CORINQ9Y5Q5 1042 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 USH1CQ9Y6N9 552 aa12.78□□□□□ -0.36
RPS28-201ENST00000417088 TPST2O60704 377 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 BGLAPP02818 100 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 CD79AP11912 226 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 ZNF35P13682 527 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 ZNF14P17017 642 aaPredicted RBP12.77□□□□□ -0.37
RPS28-201ENST00000417088 EVX1P49640 407 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 AQP5P55064 265 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 CDH15P55291 814 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 OR1Q1Q15612 314 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 BLOC1S3Q6QNY0 202 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 ZNF813Q6ZN06 617 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 ZNF627Q7L945 461 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 KRT73Q86Y46 540 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 RNF217Q8TC41 542 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 MRPL24Q96A35 216 aaKnown RBP12.77□□□□□ -0.37
RPS28-201ENST00000417088 WFDC6Q9BQY6 131 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 SPATA5L1Q9BVQ7 753 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 MRPL37Q9BZE1 423 aaKnown RBP12.77□□□□□ -0.37
RPS28-201ENST00000417088 SLC52A3Q9NQ40 469 aa12.77□□□□□ -0.37
RPS28-201ENST00000417088 TESQ9UGI8 421 aaKnown RBP12.77□□□□□ -0.37
RPS28-201ENST00000417088 TMEFF2Q9UIK5 374 aaPredicted RBP12.77□□□□□ -0.37
RPS28-201ENST00000417088 A0A0B4J2E0 115 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 A0A1B0GX12 115 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 LRRN3E7EW58 273 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 SYNGR3O43761 229 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 STX1BP61266 288 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 PIGFQ07326 219 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 PMS2P3Q13401 168 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 PAGE3Q5JUK9 113 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 RFLNBQ8N5W9 214 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 TLCD1Q96CP7 247 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 MOGAT1Q96PD6 335 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 EPYCQ99645 322 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 ASPNQ9BXN1 380 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 IKZF5Q9H5V7 419 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms