RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PPA1Q15181 289 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 RFX4Q33E94 735 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 TIMM23BQ5SRD1 257 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 NCMAPQ5T1S8 102 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 USP51Q70EK9 711 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 GPR32P1Q8NGA4 272 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 CYGBQ8WWM9 190 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 ZG16BQ96DA0 208 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 TRMT61AQ96FX7 289 aaKnown RBP18.09■□□□□ 0.49
PTPRU-203ENST00000415600 COX4I2Q96KJ9 171 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 SPATA5L1Q9BVQ7 753 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 SLC38A1Q9H2H9 487 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 FAIMQ9NVQ4 179 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 PARPBPQ9NWS1 579 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 ING1Q9UK53 422 aaPredicted RBP18.09■□□□□ 0.49
PTPRU-203ENST00000415600 ENPP4Q9Y6X5 453 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 LYZL6O75951 148 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 TNFAIP8O95379 198 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 HEXAP06865 529 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 CHRM4P08173 479 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 RRM2P31350 389 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 COPZ1P61923 177 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 TSC22D1Q15714 1073 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 LIN52Q52LA3 116 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 FBXW9Q5XUX1 488 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 KRT80Q6KB66 452 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 CNOT9Q92600 299 aaKnown RBP18.08■□□□□ 0.49
PTPRU-203ENST00000415600 PROX1Q92786 737 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF775Q96BV0 537 aaPredicted RBP18.08■□□□□ 0.49
PTPRU-203ENST00000415600 RADILQ96JH8 1075 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 AMBRA1Q9C0C7 1298 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF696Q9H7X3 374 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF701Q9NV72 531 aaPredicted RBP18.08■□□□□ 0.49
PTPRU-203ENST00000415600 PRSS50Q9UI38 385 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 LAMP3Q9UQV4 416 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 SH3GLB1Q9Y371 365 aa18.08■□□□□ 0.49
PTPRU-203ENST00000415600 TMED7-TICAM2A0A0A6YYA0 188 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 H7C1Q1 480 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 MRPL33O75394 65 aaKnown RBP18.08■□□□□ 0.48
PTPRU-203ENST00000415600 PLAUP00749 431 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 IFNW1P05000 195 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 COX5AP20674 150 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 PRKACGP22612 351 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 LARS2Q15031 903 aaKnown RBP18.08■□□□□ 0.48
PTPRU-203ENST00000415600 ETFDHQ16134 617 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 ADGRG3Q86Y34 549 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 GTPBP3Q969Y2 492 aaKnown RBP18.08■□□□□ 0.48
PTPRU-203ENST00000415600 ASB6Q9NWX5 421 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 TMEFF2Q9UIK5 374 aaPredicted RBP18.08■□□□□ 0.48
PTPRU-203ENST00000415600 ZNF232Q9UNY5 417 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 TMED7Q9Y3B3 224 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 LYVE1Q9Y5Y7 322 aa18.08■□□□□ 0.48
PTPRU-203ENST00000415600 DSPPQ9NZW4 1301 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 CIB4A0PJX0 185 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 GNAO1P09471 354 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 RHCEP18577 417 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 CCNA2P20248 432 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 SLC16A1P53985 500 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 RAD23AP54725 363 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 MRPL2Q5T653 305 aaKnown RBP18.07■□□□□ 0.48
PTPRU-203ENST00000415600 KLHL17Q6TDP4 642 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 HMGN2P46Q86SG4 172 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 RSPO3Q9BXY4 272 aaPredicted RBP18.07■□□□□ 0.48
PTPRU-203ENST00000415600 TOR3AQ9H497 397 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 PDP1Q9P0J1 537 aaPredicted RBP18.07■□□□□ 0.48
PTPRU-203ENST00000415600 ORC6Q9Y5N6 252 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 FREM1Q5H8C1 2179 aa18.07■□□□□ 0.48
PTPRU-203ENST00000415600 CLDN24A6NM45 220 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 TNFRSF11BO00300 401 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 HOXB4P17483 251 aaPredicted RBP18.06■□□□□ 0.48
PTPRU-203ENST00000415600 RPS4Y1P22090 263 aaKnown RBP18.06■□□□□ 0.48
PTPRU-203ENST00000415600 CXCR1P25024 350 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 TACR3P29371 465 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 BSPH1Q075Z2 132 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 ZIK1Q3SY52 487 aaPredicted RBP18.06■□□□□ 0.48
PTPRU-203ENST00000415600 ZNF672Q499Z4 452 aaPredicted RBP18.06■□□□□ 0.48
PTPRU-203ENST00000415600 TTC23Q5W5X9 447 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 KDM4DQ6B0I6 523 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 OR7E24Q6IFN5 339 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 OR4C15Q8NGM1 316 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 SMAP2Q8WU79 429 aaPredicted RBP18.06■□□□□ 0.48
PTPRU-203ENST00000415600 ARL5BQ96KC2 179 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 MBOAT4Q96T53 435 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 OR11A1Q9GZK7 315 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 TAS2R16Q9NYV7 291 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 OSGIN1Q9UJX0 560 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 MGAT4BQ9UQ53 548 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 SLC9A8Q9Y2E8 581 aa18.06■□□□□ 0.48
PTPRU-203ENST00000415600 FAM32AQ9Y421 112 aaKnown RBP18.06■□□□□ 0.48
PTPRU-203ENST00000415600 RAI1Q7Z5J4 1906 aaPredicted RBP18.06■□□□□ 0.48
PTPRU-203ENST00000415600 OR5H1A6NKK0 313 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 BCAS1O75363 584 aaPredicted RBP18.05■□□□□ 0.48
PTPRU-203ENST00000415600 IGHV1-2P23083 117 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 DAPP51397 102 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 SPIBQ01892 262 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 TGFBR3Q03167 851 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 OR52P1PQ8NH57 321 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 IGFBPL1Q8WX77 278 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 FAM118AQ9NWS6 357 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 USF3Q68DE3 2245 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms