RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 Q499Y3 187 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 TMEM69Q5SWH9 247 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 LINC01590Q5TEZ4 76 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 DGAT2L6Q6ZPD8 337 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ESX1Q8N693 406 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OR52H1Q8NGJ2 320 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 COQ8AQ8NI60 647 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 C1orf216Q8TAB5 229 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 LHFPL5Q8TAF8 219 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 SYNPRQ8TBG9 265 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ST8SIA4Q92187 359 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 FBXW5Q969U6 566 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 RNF166Q96A37 237 aaPredicted RBP8.94□□□□□ -0.98
CD44-206ENST00000415148 ELSPBP1Q96BH3 223 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 BMFQ96LC9 184 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 VSTM2LQ96N03 204 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ZNF578Q96N58 590 aaPredicted RBP8.94□□□□□ -0.98
CD44-206ENST00000415148 MNTQ99583 582 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 TCF7L1Q9HCS4 588 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 RXFP3Q9NSD7 469 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 MED9Q9NWA0 146 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 TAS2R10Q9NYW0 307 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 OR5V1Q9UGF6 321 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 ADAM18Q9Y3Q7 739 aa8.94□□□□□ -0.98
CD44-206ENST00000415148 RANBP2P49792 3224 aaKnown RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 OR6C65A6NJZ3 312 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 CREBL2O60519 120 aaPredicted RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 NDUFB6O95139 128 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 ZFPL1O95159 310 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 RASGRP1O95267 797 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 EGFP01133 1207 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 SEC13P55735 322 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 YPEL5P62699 121 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 GPM6BQ13491 265 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 HTR4Q13639 388 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 TMEM196Q5HYL7 178 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 ZNF626Q68DY1 528 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 RGS7BPQ6MZT1 257 aaPredicted RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 ATRAIDQ6UW56 229 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 STAC2Q6ZMT1 411 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 CFAP77Q6ZQR2 320 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 FAM220AQ7Z4H9 259 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 DND1Q8IYX4 353 aaKnown RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 MEIOBQ8N635 442 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 ZNF433Q8N7K0 673 aaPredicted RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 RGP1Q92546 391 aaPredicted RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 ALG12Q9BV10 488 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 Q9N2J8 555 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 DZANK1Q9NVP4 752 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 ZNF69Q9UC07 566 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 SPTBN5Q9NRC6 3674 aaKnown RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 TRBV5-5A0A0J9YX44 114 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 SERINC4A6NH21 518 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 HSPB2A8KAH6 182 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 FAM171A2A8MVW0 826 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 H3BUI4 141 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 CTNSO60931 367 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 CSTAP01040 98 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 VSIG10L2P0DP72 767 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 PNMTP11086 282 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 NFYAP23511 347 aaPredicted RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 GDI1P31150 447 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 FAUP35544 74 aaKnown RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 GRK6P43250 576 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 LSSP48449 732 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 NANOS3P60323 173 aaKnown RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 PSMA6P60900 246 aaKnown RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 ALKBH1Q13686 389 aaKnown RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 HSPB2Q16082 182 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 C3P1Q6ZMU1 363 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 NUP54Q7Z3B4 507 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 EXD3Q8N9H8 876 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 RCBTB1Q8NDN9 531 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 OR4N2Q8NGD1 307 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 OR6K6Q8NGW6 343 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 OR5AK2Q8NH90 309 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 THEM6Q8WUY1 208 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 THRSPQ92748 146 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 TAS2R8Q9NYW2 309 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 ING1Q9UK53 422 aaPredicted RBP8.93□□□□□ -0.98
CD44-206ENST00000415148 CA5BQ9Y2D0 317 aa8.93□□□□□ -0.98
CD44-206ENST00000415148 OR2M5A3KFT3 312 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 HMSDA8MTL9 139 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 MCRIP1C9JLW8 97 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 BET1O15155 118 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 FOXS1O43638 330 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 SUSD5O60279 629 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 PRAMEF2O60811 474 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 UPK3AO75631 287 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 TXNDC12O95881 172 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 HNRNPA2B1P22626 353 aaKnown RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 CFPP27918 469 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 IGLV3-21P80748 117 aaPredicted RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 SRSF5Q13243 272 aaKnown RBP8.92□□□□□ -0.98
CD44-206ENST00000415148 HYAL4Q2M3T9 481 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 EMC4Q5J8M3 183 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ARSKQ6UWY0 536 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 ZNF595Q8IYB9 648 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 DNAAF1Q8NEP3 725 aa8.92□□□□□ -0.98
CD44-206ENST00000415148 OR5M1Q8NGP8 315 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms