RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 CSNK2BP67870 215 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 CD47Q08722 323 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 QPRTQ15274 297 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 ZNF620Q6ZNG0 422 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 ZNF786Q8N393 782 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 CNEP1R1Q8N9A8 125 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 PFN4Q8NHR9 129 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 FAM81AQ8TBF8 368 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 TRUB1Q8WWH5 349 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 ZNF566Q969W8 418 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 ZBTB8AQ96BR9 441 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 IMPAD1Q9NX62 359 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 PCDHGB5Q9Y5G0 923 aa15.1■□□□□ 0.01
SCAMP4-204ENST00000414057 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 EFCAB9A8MZ26 197 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 TNFSF13O75888 250 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 SOX14O95416 240 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 CCDC159P0C7I6 412 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 SAGP10523 405 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 APOBEC1P41238 236 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 ZNF41P51814 821 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 CDK5Q00535 292 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 MAD2L1BPQ15013 274 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 ANKDD1AQ495B1 522 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 C6orf141Q5SZD1 244 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 C12orf73Q69YU5 71 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 SLC27A4Q6P1M0 643 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 PLXDC2Q6UX71 529 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 CASP12Q6UXS9 341 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 OR5M1Q8NGP8 315 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 LIPHQ8WWY8 451 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 SGTBQ96EQ0 304 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 CXXC4Q9H2H0 198 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 C20orf141Q9NUB4 165 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 OSGIN1Q9UJX0 560 aa15.09■□□□□ 0.01
SCAMP4-204ENST00000414057 SH3D21A4FU49 640 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 TRIM64A6NGJ6 449 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 KPNA4O00629 521 aaPredicted RBP15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 CDC42EP2O14613 210 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 NTN1O95631 604 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 GIPRP48546 466 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 SUCLG1P53597 346 aaKnown RBP15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 CDK5R2Q13319 367 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 PON3Q15166 354 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 SLC25A53Q5H9E4 307 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 ENTHD1Q8IYW4 607 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 OR52L1Q8NGH7 329 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 RHOXF1Q8NHV9 184 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 SMPDL3BQ92485 455 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 STARD4Q96DR4 205 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 MRGPRX4Q96LA9 322 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 PRRG4Q9BZD6 226 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 RNF122Q9H9V4 155 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 ELOVL5Q9NYP7 299 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 VDAC3Q9Y277 283 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 POLQO75417 2590 aa15.08■□□□□ 0.01
SCAMP4-204ENST00000414057 IGKV1D-42A0A075B6H8 117 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 GMFGO60234 142 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 RAF1P04049 648 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 PRKCAP17252 672 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 MAKP20794 623 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 CLDN15P56746 228 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 CLDN20P56880 219 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 GABARAPL2P60520 117 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 SNRPGP62308 76 aaKnown RBP15.08■□□□□ 0
SCAMP4-204ENST00000414057 BLMHQ13867 455 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 TOMM34Q15785 309 aaPredicted RBP15.08■□□□□ 0
SCAMP4-204ENST00000414057 TMEM44Q2T9K0 475 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 PAMR1Q6UXH9 720 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 GTPBP8Q8N3Z3 284 aaPredicted RBP15.08■□□□□ 0
SCAMP4-204ENST00000414057 OR8J1Q8NGP2 316 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 FNDC9Q8TBE3 224 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 FANK1Q8TC84 345 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 STK35Q8TDR2 534 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 ZNF845Q96IR2 970 aaPredicted RBP15.08■□□□□ 0
SCAMP4-204ENST00000414057 BATF3Q9NR55 127 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 TBC1D23Q9NUY8 699 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 ZNF226Q9NYT6 803 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 MCTS1Q9ULC4 181 aaKnown RBP15.08■□□□□ 0
SCAMP4-204ENST00000414057 PLEKHA6Q9Y2H5 1048 aa15.08■□□□□ 0
SCAMP4-204ENST00000414057 CCDC168Q8NDH2 2452 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 ANKRD17O75179 2603 aaKnown RBP15.07■□□□□ 0
SCAMP4-204ENST00000414057 KIAA1549Q9HCM3 1950 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 TMED7-TICAM2A0A0A6YYA0 188 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 A8MVM7 634 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 H0YC42 278 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 CD8BP10966 210 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 FKBP2P26885 142 aaKnown RBP15.07■□□□□ 0
SCAMP4-204ENST00000414057 ADH6P28332 368 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 EIF1P41567 113 aaKnown RBP15.07■□□□□ 0
SCAMP4-204ENST00000414057 GINS1Q14691 196 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 CTU2Q2VPK5 515 aaKnown RBP15.07■□□□□ 0
SCAMP4-204ENST00000414057 PDSS1Q5T2R2 415 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 TMEM154Q6P9G4 183 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 SMARCD3Q6STE5 483 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 OAFQ86UD1 273 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 P3H2Q8IVL5 708 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 OR2T33Q8NG76 320 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 OR6S1Q8NH40 331 aa15.07■□□□□ 0
SCAMP4-204ENST00000414057 MBD6Q96DN6 1003 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms