RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ERRFI1Q9UJM3 462 aaPredicted RBP8.59□□□□□ -1.03
SNHG3-201ENST00000413987 ZDHHC8Q9ULC8 765 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 MMP17Q9ULZ9 603 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 MGAT4AQ9UM21 535 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 LSM2Q9Y333 95 aaKnown RBP8.59□□□□□ -1.03
SNHG3-201ENST00000413987 CFAP54Q96N23 3096 aa8.59□□□□□ -1.03
SNHG3-201ENST00000413987 WDFY3Q8IZQ1 3526 aa8.59□□□□□ -1.04
SNHG3-201ENST00000413987 A0A0A6YYH2 397 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 RAB19A4D1S5 217 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 A6NJ64 397 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 FABP7O15540 132 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 ANXA5P08758 320 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 COX5BP10606 129 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 ICAM2P13598 275 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 HK1P19367 917 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TACR3P29371 465 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 F2RL1P55085 397 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 MRPS21P82921 87 aaKnown RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 BDH1Q02338 343 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 HNRNPA0Q13151 305 aaKnown RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TSC22D1Q15714 1073 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF284Q2VY69 593 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 ZC3H14Q6PJT7 736 aaKnown RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 WASH2PQ6VEQ5 465 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 DEFB119Q8N690 84 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 BCORP1Q8N888 145 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 PROKR2Q8NFJ6 384 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 RBPMSQ93062 196 aaKnown RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TEFMQ96QE5 360 aaKnown RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TAAR6Q96RI8 345 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TAS2R16Q9NYV7 291 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TMEM184BQ9Y519 407 aaPredicted RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 SLCO1B1Q9Y6L6 691 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 PRSS29PA6NIE9 313 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 SMLR1H3BR10 107 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TEX46H3BTG2 121 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 MANBAO00462 879 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 AP2A2O94973 939 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 DHFRP00374 187 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 CTXN2P0C2S0 81 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 OR56A5P0C7T3 313 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF7P17097 686 aaPredicted RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 PPIBP23284 216 aaKnown RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 IL12BP29460 328 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 CHI3L1P36222 383 aaPredicted RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 GPR1P46091 355 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 CLDN2P57739 230 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 HMGCS1Q01581 520 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 KLHL22Q53GT1 634 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 SAMD5Q5TGI4 173 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 PRAMEF7Q5VXH5 474 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 UBE3DQ7Z6J8 389 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 VRK3Q8IV63 474 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TRAM1L1Q8N609 369 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 FAM46DQ8NEK8 389 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 ATP6V1C2Q8NEY4 427 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TMEM163Q8TC26 289 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 GLYATL1Q969I3 302 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 UPRTQ96BW1 309 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 ZBED6CLQ96FA7 236 aaPredicted RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 KCTD7Q96MP8 289 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 SOSTQ9BQB4 213 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 POLR2J2Q9GZM3 115 aaKnown RBP8.58□□□□□ -1.04
SNHG3-201ENST00000413987 OR2AG1Q9H205 316 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 DPEP2Q9H4A9 486 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 PPP1R3EQ9H7J1 279 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TBC1D17Q9HA65 648 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 SLC25A19Q9HC21 320 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 PEMTQ9UBM1 199 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 TINAGQ9UJW2 476 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 CDH10Q9Y6N8 788 aa8.58□□□□□ -1.04
SNHG3-201ENST00000413987 FAM90A27PA6NNH2 459 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF785A8K8V0 405 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 MAGEB17A8MXT2 336 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 LATO43561 262 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 TPST2O60704 377 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 CHRM5P08912 532 aaPredicted RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 ANXA4P09525 319 aaPredicted RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 ZP3P21754 424 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 F8A1P23610 371 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 CCR7P32248 378 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 KIR3DL1P43629 444 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 RAB9AP51151 201 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 DCDC1P59894 354 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 SHC2P98077 582 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 IRF4Q15306 451 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 GPR33Q49SQ1 333 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 TMEM52BQ4KMG9 183 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 TMEM220Q6QAJ8 160 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 FAM180AQ6UWF9 173 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 CERS6Q6ZMG9 384 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 FAM92BQ6ZTR7 304 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 PTOV1Q86YD1 416 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 LGI4Q8N135 537 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 BEND2Q8NDZ0 799 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 OR4C15Q8NGM1 316 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 PHF21AQ96BD5 680 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 CHRDL1Q9BU40 450 aa8.57□□□□□ -1.04
SNHG3-201ENST00000413987 PAPOLGQ9BWT3 736 aaKnown RBP8.57□□□□□ -1.04
SNHG3-201ENST00000413987 SIRPDQ9H106 197 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms