RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PIGWQ7Z7B1 504 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 PIK3C3Q8NEB9 887 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 PFN4Q8NHR9 129 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 BCL2L2Q92843 193 aaPredicted RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 ZNF837Q96EG3 531 aaPredicted RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 KCTD14Q9BQ13 255 aaPredicted RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 POLR2J2Q9GZM3 115 aaKnown RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 POLR2J3Q9H1A7 115 aaKnown RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 CRLF2Q9HC73 371 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 CISD1Q9NZ45 108 aaKnown RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 METRNQ9UJH8 293 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 MGAT4BQ9UQ53 548 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 ARL2BPQ9Y2Y0 163 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 MT-ND1P03886 318 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 HIST1H2ABP04908 130 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 ASAH2BP0C7U1 165 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 DANCRP0C864 163 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 NCK1P16333 377 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 RBM34P42696 430 aaKnown RBP12.95□□□□□ -0.34
LIMS4-201ENST00000413601 YAP1P46937 504 aaKnown RBP12.95□□□□□ -0.34
LIMS4-201ENST00000413601 PTH2RP49190 550 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 CDH11P55287 796 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 SH3BGRP55822 239 aaPredicted RBP12.95□□□□□ -0.34
LIMS4-201ENST00000413601 TUBA1BP68363 451 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 TUBA4AP68366 448 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 CAMK2DQ13557 499 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 CEACAM16Q2WEN9 425 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 PGGHGQ32M88 737 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 Q5PR19 223 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 SHEQ5VZ18 495 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 ANKRD16Q6P6B7 361 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 SLC22A25Q6T423 547 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 TUBA1AQ71U36 451 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 HIST3H2AQ7L7L0 130 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 SLC46A3Q7Z3Q1 461 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 C20orf196Q8IYI0 205 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 ANKK1Q8NFD2 765 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 HIST1H2ACQ93077 130 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 RADILQ96JH8 1075 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 NELFAQ9H3P2 528 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 CXorf56Q9H5V9 222 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 C20orf141Q9NUB4 165 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 ABCD2Q9UBJ2 740 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF229Q9UJW7 825 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 A4GNTQ9UNA3 340 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 MAGED1Q9Y5V3 778 aaPredicted RBP12.95□□□□□ -0.34
LIMS4-201ENST00000413601 SNX13Q9Y5W8 968 aa12.95□□□□□ -0.34
LIMS4-201ENST00000413601 MAP1AP78559 2803 aaPredicted RBP12.94□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF726A6NNF4 738 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 BLOC1S5-TXNDC5H3BN57 136 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 NDUFAB1O14561 156 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 RNF13O43567 381 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 SERPINA1P01009 418 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 THRBP10828 461 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 IFNGR1P15260 489 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 FUT4P22083 530 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 BIDP55957 195 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 UBE2NP61088 152 aaKnown RBP12.94□□□□□ -0.34
LIMS4-201ENST00000413601 RPS4XP62701 263 aaKnown RBP12.94□□□□□ -0.34
LIMS4-201ENST00000413601 ZP4Q12836 540 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 C1QTNF12Q5T7M4 302 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 CBLL1Q75N03 491 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 SLC35D2Q76EJ3 337 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 NANOGNBQ7Z5D8 188 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 DEPDC4Q8N2C3 294 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 FAM162AQ96A26 154 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 LRR1Q96L50 414 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 PRRC1Q96M27 445 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 HS6ST2Q96MM7 605 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 LRRC37BQ96QE4 947 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 GSX2Q9BZM3 304 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 SPAG4Q9NPE6 437 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 OBP2BQ9NPH6 170 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF701Q9NV72 531 aaPredicted RBP12.94□□□□□ -0.34
LIMS4-201ENST00000413601 ADA2Q9NZK5 511 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 RHCGQ9UBD6 479 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 EGFL7Q9UHF1 273 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 POU2F3Q9UKI9 436 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 USF3Q68DE3 2245 aa12.94□□□□□ -0.34
LIMS4-201ENST00000413601 PLCE1Q9P212 2302 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 ARPC4-TTLL3A0A0A6YYG9 625 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF99A8MXY4 864 aaPredicted RBP12.93□□□□□ -0.34
LIMS4-201ENST00000413601 E7EQL1 145 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 J3KTA2 159 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 PIP5K1CO60331 668 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 SEC14L2O76054 403 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 OR7A10O76100 309 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 IFNW1P05000 195 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 PAX1P15863 534 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 FUT1P19526 365 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 ST3GAL3Q11203 375 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 IFI44LQ53G44 452 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 FKBP9P1Q75LS8 142 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 YTHDF3Q7Z739 585 aaKnown RBP12.93□□□□□ -0.34
LIMS4-201ENST00000413601 RNF148Q8N7C7 305 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms