RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 LYPD3O95274 346 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 HPRP00739 348 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 THY1P04216 161 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 HIST1H2ABP04908 130 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 ADORA3P0DMS8 318 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 THRBP10828 461 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 IFNA8P32881 189 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 RBM34P42696 430 aaKnown RBP13.72□□□□□ -0.21
MCF2L-211ENST00000413354 C3orf36Q3SXR2 165 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 CYBRD1Q53TN4 286 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 ZNF544Q6NX49 715 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 HACD2Q6Y1H2 254 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 HIST3H2AQ7L7L0 130 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 LINGO2Q7L985 606 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 CCDC36Q8IYA8 594 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 HIST1H2ACQ93077 130 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 CMTM5Q96DZ9 223 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 COX4I2Q96KJ9 171 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 SLC38A2Q96QD8 506 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 BARX1Q9HBU1 254 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-211ENST00000413354 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 GPR35Q9HC97 309 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 USP22Q9UPT9 525 aa13.72□□□□□ -0.21
MCF2L-211ENST00000413354 SLC35F4A4IF30 521 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 ZNF99A8MXY4 864 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-211ENST00000413354 LRRN3E7EW58 273 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 KPNA4O00629 521 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-211ENST00000413354 CH25HO95992 272 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 IGF2P01344 180 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 UMPSP11172 480 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 HLA-DOBP13765 273 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 TTKP33981 857 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 FABP6P51161 128 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 ARF1P84077 181 aaKnown RBP13.71□□□□□ -0.21
MCF2L-211ENST00000413354 CEACAM16Q2WEN9 425 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 CARD17Q5XLA6 110 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 NANOGNBQ7Z5D8 188 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 TSPYL5Q86VY4 417 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-211ENST00000413354 C20orf196Q8IYI0 205 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 FAM169BQ8N8A8 192 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 ADAD1Q96M93 576 aaKnown RBP13.71□□□□□ -0.21
MCF2L-211ENST00000413354 HS6ST2Q96MM7 605 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 ELAC2Q9BQ52 826 aaKnown RBP13.71□□□□□ -0.21
MCF2L-211ENST00000413354 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 CBLN4Q9NTU7 201 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 CMTM6Q9NX76 183 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 CRNNQ9UBG3 495 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-211ENST00000413354 ATP23Q9Y6H3 246 aa13.71□□□□□ -0.21
MCF2L-211ENST00000413354 A0A096LPE4 126 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 A0A1W2PPZ6 126 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 E7EQL1 145 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 C11orf98E9PRG8 122 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 H7C1Q1 480 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 M0R3G1 203 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 GSTA4O15217 222 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 SERPINI2O75830 405 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 TNFRSF1BP20333 461 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 CDKN1AP38936 164 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 NUDT2P50583 147 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 SLC7A2P52569 658 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 LIPEQ05469 1076 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 ZP4Q12836 540 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 SLC15A3Q8IY34 581 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 MUC15Q8N387 334 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 OR6N1Q8NGY5 312 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 TPD52L3Q96J77 140 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 PRSS27Q9BQR3 290 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 EMC6Q9BV81 110 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 ULBP2Q9BZM5 246 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 FAM107BQ9H098 131 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 NELFAQ9H3P2 528 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 MED29Q9NX70 200 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 RIMS3Q9UJD0 308 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 SETD2Q9BYW2 2564 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-211ENST00000413354 VPS13CQ709C8 3753 aa13.7□□□□□ -0.22
MCF2L-211ENST00000413354 IGHV1-18A0A0C4DH31 117 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 ATP6V1G2-DDX39BF2Z307 99 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 RNF13O43567 381 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 ENTPD5O75356 428 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 CD8AP01732 235 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 CRYAAP02489 173 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 MT-ND1P03886 318 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 ASAH2BP0C7U1 165 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 BMP4P12644 408 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 PRDX6P30041 224 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 OR1E2P47887 323 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 CSNK1A1P48729 337 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 BIDP55957 195 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 SELENOWP63302 87 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 ST3GAL3Q11203 375 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 CAMK2DQ13557 499 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 B3GLCTQ6Y288 498 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 SLC35D2Q76EJ3 337 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 HDDC2Q7Z4H3 204 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 CPLX4Q7Z7G2 160 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 TREML1Q86YW5 311 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 OR6X1Q8NH79 312 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 TMEM239Q8WW34 195 aa13.69□□□□□ -0.22
MCF2L-211ENST00000413354 NANOS1Q8WY41 292 aaKnown RBP13.69□□□□□ -0.22
MCF2L-211ENST00000413354 TXNDC15Q96J42 360 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms