RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 ULK3Q6PHR2 472 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 DLEU7Q6UYE1 221 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 NET1Q7Z628 596 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-204ENST00000413232 C20orf196Q8IYI0 205 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 SVOPLQ8N434 492 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 TMEM158Q8WZ71 300 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 ZNF75AQ96N20 296 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 SHARPINQ9H0F6 387 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 ZNF442Q9H7R0 627 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 MED29Q9NX70 200 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 B3GNT2Q9NY97 397 aa16.62■□□□□ 0.25
CPSF7-204ENST00000413232 A0A0B4J2E0 115 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 LOC100289279A0A1B0GTE1 492 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 A0A1B0GX12 115 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 SH3PXD2BA1X283 911 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 LRP5LA4QPB2 252 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 ZNF99A8MXY4 864 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-204ENST00000413232 hCG_2039718K7EN88 272 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 TGDSO95455 350 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 HLA-HP01893 362 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 APEHP13798 732 aaKnown RBP16.61■□□□□ 0.25
CPSF7-204ENST00000413232 KRTAP24-1Q3LI83 254 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 AGKQ53H12 422 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 FAM91A1Q658Y4 838 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 C5orf46Q6UWT4 87 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 ADPRHL1Q8NDY3 354 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 PIK3C3Q8NEB9 887 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 RNF217Q8TC41 542 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 SLC47A1Q96FL8 570 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 MS4A3Q96HJ5 214 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 CCDC28BQ9BUN5 200 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 TMEM38AQ9H6F2 299 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 ZNF224Q9NZL3 707 aa16.61■□□□□ 0.25
CPSF7-204ENST00000413232 MFN2O95140 757 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 STAMBPO95630 424 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 NPR2P20594 1047 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 IL2RGP31785 369 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 ARR3P36575 388 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 CDH12P55289 794 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 RGS8P57771 180 aaPredicted RBP16.6■□□□□ 0.25
CPSF7-204ENST00000413232 IQCCQ4KMZ1 466 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 FAM120AOSQ5T036 256 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 AGBL2Q5U5Z8 902 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 FAM166AQ6J272 317 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 SPATA21Q7Z572 469 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 KRT73Q86Y46 540 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 PTOV1Q86YD1 416 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 UEVLDQ8IX04 471 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 CDK20Q8IZL9 346 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 SMYD1Q8NB12 490 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 CPPED1Q9BRF8 314 aaPredicted RBP16.6■□□□□ 0.25
CPSF7-204ENST00000413232 LPAR3Q9UBY5 353 aa16.6■□□□□ 0.25
CPSF7-204ENST00000413232 TESQ9UGI8 421 aaKnown RBP16.6■□□□□ 0.25
CPSF7-204ENST00000413232 DAOP14920 347 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 NQO1P15559 274 aaKnown RBP16.59■□□□□ 0.25
CPSF7-204ENST00000413232 ZNF23P17027 643 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 SLC6A2P23975 617 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 CAPZA2P47755 286 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 POU3F1Q03052 451 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-204ENST00000413232 PIGFQ07326 219 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 CAMK2DQ13557 499 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 SELPLGQ14242 412 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 DUSP7Q16829 419 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 KRT80Q6KB66 452 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 OR6S1Q8NH40 331 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 LRRC8CQ8TDW0 803 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 SPATA5L1Q9BVQ7 753 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 RAB1BQ9H0U4 201 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 TMEM27Q9HBJ8 222 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 MYOZ1Q9NP98 299 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-204ENST00000413232 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-204ENST00000413232 KCNS2Q9ULS6 477 aa16.59■□□□□ 0.25
CPSF7-204ENST00000413232 LYNX1G3V0Z9 82 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 M0R3H8 397 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 PLPP3O14495 311 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 LILRA1O75019 489 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 THY1P04216 161 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 LYNX1P0DP58 116 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 PPIBP23284 216 aaKnown RBP16.58■□□□□ 0.24
CPSF7-204ENST00000413232 GIFP27352 417 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 PCBP3P57721 371 aaKnown RBP16.58■□□□□ 0.24
CPSF7-204ENST00000413232 PMS2P3Q13401 168 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 SNTB2Q13425 540 aaKnown RBP16.58■□□□□ 0.24
CPSF7-204ENST00000413232 DAG1Q14118 895 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 MFSD13AQ14CX5 517 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 NPTX1Q15818 432 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 RUNDC3AQ59EK9 446 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 LINC00114Q6XXX2 140 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 WDR88Q6ZMY6 472 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 TSPYL5Q86VY4 417 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-204ENST00000413232 ARMC8Q8IUR7 673 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 SCAIQ8N9R8 606 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 GPR32P1Q8NGA4 272 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 OR4D11Q8NGI4 311 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 LRR1Q96L50 414 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 MOV10Q9HCE1 1003 aaKnown RBP16.58■□□□□ 0.24
CPSF7-204ENST00000413232 MRPL39Q9NYK5 338 aaKnown RBP16.58■□□□□ 0.24
CPSF7-204ENST00000413232 USP22Q9UPT9 525 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 CORINQ9Y5Q5 1042 aa16.58■□□□□ 0.24
CPSF7-204ENST00000413232 ERLIN1O75477 346 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms