RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MAKP20794 623 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 CD80P33681 288 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 RIDAP52758 137 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 REEP5Q00765 189 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 ALKBH1Q13686 389 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 LTB4RQ15722 352 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 C11orf87Q6NUJ2 197 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 TMEM25Q86YD3 366 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 WFIKKN2Q8TEU8 576 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 WBP2Q969T9 261 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 ALG12Q9BV10 488 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 MAN2C1Q9NTJ4 1040 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 CXCR1P25024 350 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 BSGP35613 385 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 DTD2Q96FN9 168 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 TSPAN11A1L157 253 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 A8MXK9 166 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 TEAD2Q15562 447 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 C3orf33Q6P1S2 294 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 RHOUQ7L0Q8 258 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 TAS1R1Q7RTX1 841 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 CPXM2Q8N436 756 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 TEX19Q8NA77 164 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 DIO2Q92813 273 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 MRPS24Q96EL2 167 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 SLCO1C1Q9NYB5 712 aa12.8□□□□□ -0.36
CLTCL1-201ENST00000412649 ANKRD61A6NGH8 418 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 TMEM212A6NML5 194 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 FCMRO60667 390 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 TMEM127O75204 238 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 OR7A5Q15622 319 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 LRRTM1Q86UE6 522 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 KCNRGQ8N5I3 272 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 OR11G2Q8NGC1 345 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 RELTQ969Z4 430 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 AHCYL2Q96HN2 611 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 MYADMQ96S97 322 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 IL21RQ9HBE5 538 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 CTSFQ9UBX1 484 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 ATG4BQ9Y4P1 393 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 CRYBA1P05813 215 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 SLC22A12Q96S37 553 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 CSAG2Q9Y5P2 127 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 CACNA1CQ13936 2221 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 LOC100289279A0A1B0GTE1 492 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 CLDN4O14493 209 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 ABCD4O14678 606 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 AMY2BP19961 511 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 OR2B8PP59922 312 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 KIAA0141Q14154 515 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 PAPD4Q6PIY7 484 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 STAC2Q6ZMT1 411 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 PHOSPHO1Q8TCT1 267 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 RAB3CQ96E17 227 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 SOSTQ9BQB4 213 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 HEXA-AS1Q9H8Q6 139 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 WSB2Q9NYS7 404 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 WNT6Q9Y6F9 365 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 SDHAP31040 664 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 ARL4DP49703 201 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 EBPQ15125 230 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 ZNF679Q8IYX0 411 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 OR6N1Q8NGY5 312 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 ZNF75AQ96N20 296 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 ARHGDIGQ99819 225 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 GPR34Q9UPC5 381 aa12.79□□□□□ -0.36
CLTCL1-201ENST00000412649 C17orf113A0A1B0GUU1 675 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 C11orf98E9PRG8 122 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 XRCC3O43542 346 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 ZNF660Q6AZW8 331 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 AWAT2Q6E213 333 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 MIOXQ9UGB7 285 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 SHISA3A0PJX4 238 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 MPTX1A8MV57 137 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 CXCL14O95715 111 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 CHATP28329 748 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 ALG10Q5BKT4 473 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 EOGTQ5NDL2 527 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 SLC18B1Q6NT16 456 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 OR2A12Q8NGT7 310 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 ZDHHC12Q96GR4 267 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 PTCHD1Q96NR3 888 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 SMIM3Q9BZL3 60 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 TGIF2Q9GZN2 237 aa12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 ZMAT3Q9HA38 289 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 MRPS23Q9Y3D9 190 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 SIRT4Q9Y6E7 314 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-201ENST00000412649 ARID1BQ8NFD5 2236 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms