RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ABHD12BQ7Z5M8 362 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 RTL3Q8N8U3 475 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2T12Q8NG77 320 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR4D5Q8NGN0 318 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MITD1Q8WV92 249 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 NANOS1Q8WY41 292 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 TAAR8Q969N4 342 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR2V2Q96R30 315 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 FCRL5Q96RD9 977 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SLC35A5Q9BS91 424 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 POPDC3Q9HBV1 291 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SERHLQ9NQF3 203 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CA10Q9NS85 328 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MAP4K5Q9Y4K4 846 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MIA3Q5JRA6 1907 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 A0A1B0GW15 77 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 ELOVL7A1L3X0 281 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 OR5H14A6NHG9 310 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 H3BNC9 293 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 AQP7O14520 342 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 OR7A17O14581 309 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 AZIN1O14977 448 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 PPP1R2P9O14990 202 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 SSNA1O43805 119 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 RDH16O75452 317 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 ECI2O75521 394 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HLA-DOAP06340 250 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 UBBP0CG47 229 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 NID1P14543 1247 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 FDXRP22570 491 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 GCH1P30793 250 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 TIMP3P35625 211 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 RFX3P48380 749 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 STK19P49842 368 aaPredicted RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 PDX1P52945 283 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 ATP5J2P56134 94 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 RPS27AP62979 156 aaKnown RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 UBA52P62987 128 aaKnown RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 CDC42EP1Q00587 391 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 CAMK2GQ13555 558 aaPredicted RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 LDLRAD2Q5SZI1 272 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 PLAG1Q6DJT9 500 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 FAM151BQ6UXP7 276 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 Q6ZTK2 550 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 ASB18Q6ZVZ8 466 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 AMZ2Q86W34 360 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 SDR9C7Q8NEX9 313 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 RHBDD1Q8TEB9 315 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 CASTOR1Q8WTX7 329 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 PNPLA2Q96AD5 504 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 OR52E6Q96RD3 313 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 BOCQ9BWV1 1114 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 UBQLN3Q9H347 655 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 TMPRSS4Q9NRS4 437 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 TIMM10BQ9Y5J6 103 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 UBIAD1Q9Y5Z9 338 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 PATJQ8NI35 1801 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 LOC285095A0A1B0GVY8 99 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 SMCO3A2RU48 225 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 GNGT2O14610 69 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 ADRA2AP08913 450 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 SLC35E2P0CK97 266 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 SCGB1A1P11684 91 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 CYP2F1P24903 491 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HTR2CP28335 458 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 CORO1AP31146 461 aaKnown RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 RPL29P47914 159 aaKnown RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 PNLIPRP1P54315 467 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 SH3BP2P78314 561 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 MTAPQ13126 283 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 RUNX2Q13950 521 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 PAFAH1B3Q15102 231 aaKnown RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 FBXO47Q5MNV8 452 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 C1orf194Q5T5A4 169 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 ZNF57Q68EA5 555 aaPredicted RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 KIAA0930Q6ICG6 404 aaPredicted RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 TRNP1Q6NT89 227 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 ATG4DQ86TL0 474 aaPredicted RBP4.79□□□□□ -1.64
HERC4-205ENST00000412272 FAM24BQ8N5W8 94 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 OR13C5Q8NGS8 318 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 OR4S2Q8NH73 311 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 RHEBL1Q8TAI7 183 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 PROKR1Q8TCW9 393 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 HASPINQ8TF76 798 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 CMBLQ96DG6 245 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 FOXN4Q96NZ1 517 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 CHIAQ9BZP6 476 aa4.79□□□□□ -1.64
HERC4-205ENST00000412272 SIK2Q9H0K1 926 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms