RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 AP4M1O00189 453 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 COX7A2P2O60397 106 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TUSC2O75896 110 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MAS1P04201 325 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 DBHP09172 617 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FGF3P11487 239 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GDF1P27539 372 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CACNG1Q06432 222 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OPN5Q6U736 354 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 LRRC55Q6ZSA7 311 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ACOT7LQ6ZUV0 252 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 NRMQ8IXM6 262 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PRSS35Q8N3Z0 413 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 POC1AQ8NBT0 407 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ABHD4Q8TB40 342 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MARC2Q969Z3 335 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PCED1BQ96HM7 432 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 NKX6-2Q9C056 277 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ACER3Q9NUN7 267 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 APOBEC3BQ9UH17 382 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CACNG2Q9Y698 323 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FGD6Q6ZV73 1430 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 RIMS2Q9UQ26 1411 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MAPKBP1O60336 1514 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CNTNAP2Q9UHC6 1331 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PGPEP1LA6NFU8 196 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM210A6NLX4 147 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GALR2O43603 387 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 AKR7A3O95154 331 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TNFP01375 233 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ABHD2P08910 425 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF735P0CB33 412 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 RPA2P15927 270 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SRP9P49458 86 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 HMGA2P52926 109 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 DCDP81605 110 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ARHGAP8P85298 464 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GAMTQ14353 236 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 LTB4RQ15722 352 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 EML3Q32P44 896 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 DRAM2Q6UX65 266 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 H2BFWTQ7Z2G1 175 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PRICKLE2Q7Z3G6 844 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 HAPLN4Q86UW8 402 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TEX29Q8N6K0 151 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 DTWD2Q8NBA8 298 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OR8B3Q8NGG8 313 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 RGP1Q92546 391 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MCHR2Q969V1 340 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FER1L6-AS2Q96M78 137 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SEMA3CQ99985 751 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 HOXD1Q9GZZ0 328 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MIOXQ9UGB7 285 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FBXO4Q9UKT5 387 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 BTRCQ9Y297 605 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FAM205AQ6ZU69 1335 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 K7ERS5 55 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PIRO00625 290 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FFAR2O15552 330 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 COCHO43405 550 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MELTFP08582 738 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ITGAMP11215 1152 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MYCLP1P12525 358 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 KCNA6P17658 529 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 RBM11P57052 281 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 B2MP61769 119 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GPR50Q13585 617 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SBK1Q52WX2 424 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GPR153Q6NV75 609 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TMIGD1Q6UXZ0 262 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 C4orf32Q8N8J7 132 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SYT8Q8NBV8 401 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OR4K5Q8NGD3 323 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OR5AK2Q8NH90 309 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GOT1L1Q8NHS2 421 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OLIG1Q8TAK6 271 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SCARB1Q8WTV0 552 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 STYXQ8WUJ0 223 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 UTP4Q969X6 686 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 DTD2Q96FN9 168 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 UBE2E2Q96LR5 201 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 POLD4Q9HCU8 107 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 AMBNQ9NP70 447 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 KCNMB3Q9NPA1 279 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 BTG4Q9NY30 223 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PSENENQ9NZ42 101 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 NAT8Q9UHE5 227 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 STYXL1Q9Y6J8 313 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GRIN2AQ12879 1464 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MCRIP1C9JLW8 97 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 H3BSA7 217 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CYR61O00622 381 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ZBTB22O15209 634 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CTNSO60931 367 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SELEP16581 610 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PRCPP42785 496 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 EMP3P54852 163 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SLC35B1P78383 322 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms