RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 OR52E5Q8NH55 327 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 CCDC12Q8WUD4 166 aaPredicted RBP4.08□□□□□ -1.76
LSM5-206ENST00000409987 RAB3CQ96E17 227 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 XPO6Q96QU8 1125 aaKnown RBP4.08□□□□□ -1.76
LSM5-206ENST00000409987 ATP5SQ99766 215 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 RBM4BQ9BQ04 359 aaKnown RBP4.08□□□□□ -1.76
LSM5-206ENST00000409987 NAT10Q9H0A0 1025 aaKnown RBP4.08□□□□□ -1.76
LSM5-206ENST00000409987 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 CSNK1G1Q9HCP0 422 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 NRBP2Q9NSY0 501 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 EHFQ9NZC4 300 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 ADAM22Q9P0K1 906 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 JCADQ9P266 1359 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 CPQQ9Y646 472 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 PRSS21Q9Y6M0 314 aa4.08□□□□□ -1.76
LSM5-206ENST00000409987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.07□□□□□ -1.76
LSM5-206ENST00000409987 MED14O60244 1454 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 GOLGA3Q08378 1498 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 IGKV3D-15A0A087WSY6 115 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 A0A1B0GUS0 222 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 TMEM120BA0PK00 339 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 SAGE2PA6NJ88 616 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 A8MUA0 341 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 HSD17B6O14756 317 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 PI15O43692 258 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 PRKYO43930 277 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 OR7A10O76100 309 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 LYPD3O95274 346 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 LGALS2P05162 132 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 S100A6P06703 90 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 DCNP07585 359 aaKnown RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 HOXB8P17481 243 aaPredicted RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 SLC1A1P43005 524 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 PRKXP51817 358 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 MFAP2P55001 183 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 PSMC5P62195 406 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 GNMTQ14749 295 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 VAMP3Q15836 100 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 FAM182AQ5T1J6 154 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 C6orf183Q5T699 404 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 EMBQ6PCB8 327 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 CCDC137Q6PK04 289 aaKnown RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 CERS6Q6ZMG9 384 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 GPRIN3Q6ZVF9 776 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 SNX20Q7Z614 316 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 RBM45Q8IUH3 476 aaKnown RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 APRG1Q8IVJ8 170 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 C4orf32Q8N8J7 132 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 LRRC75AQ8NAA5 344 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 INO80EQ8NBZ0 244 aaPredicted RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 RFESDQ8TAC1 157 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 ZPLD1Q8TCW7 415 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 SETD7Q8WTS6 366 aaKnown RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 DDI1Q8WTU0 396 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 PIH1D2Q8WWB5 315 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 TRUB1Q8WWH5 349 aaKnown RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 HTR3CQ8WXA8 447 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 CACNG8Q8WXS5 425 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 UFD1Q92890 307 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 STMN2Q93045 179 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 CCDC126Q96EE4 140 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 CSPG4P5Q96PW8 444 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 CYTH2Q99418 400 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 SLC29A1Q99808 456 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 PRRG3Q9BZD7 231 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 RAB1BQ9H0U4 201 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 OR51M1Q9H341 326 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 ZNF385DQ9H6B1 395 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 REEP4Q9H6H4 257 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 HEXA-AS1Q9H8Q6 139 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 ERVW-1Q9UQF0 538 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 RNF24Q9Y225 148 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 RBMX2Q9Y388 322 aaKnown RBP4.07□□□□□ -1.76
LSM5-206ENST00000409987 MOB4Q9Y3A3 225 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 KPTNQ9Y664 436 aa4.07□□□□□ -1.76
LSM5-206ENST00000409987 REREQ9P2R6 1566 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 PLCH2O75038 1416 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 TRAV6A0A075B6T7 132 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 A0A1W2PRD5 423 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 E7ESA3 106 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 FCN3O75636 299 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 OXSR1O95747 527 aaPredicted RBP4.06□□□□□ -1.76
LSM5-206ENST00000409987 ABOP16442 354 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 SPRP35270 261 aaPredicted RBP4.06□□□□□ -1.76
LSM5-206ENST00000409987 LEPP41159 167 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 ELK3P41970 407 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 YAP1P46937 504 aaKnown RBP4.06□□□□□ -1.76
LSM5-206ENST00000409987 NPBWR2P48146 333 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 TMED10P49755 219 aaKnown RBP4.06□□□□□ -1.76
LSM5-206ENST00000409987 CCNHP51946 323 aaPredicted RBP4.06□□□□□ -1.76
LSM5-206ENST00000409987 KPNA2P52292 529 aaKnown RBP4.06□□□□□ -1.76
LSM5-206ENST00000409987 RIPK4P57078 832 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 MRPS22P82650 360 aaKnown RBP4.06□□□□□ -1.76
LSM5-206ENST00000409987 FCHO2Q0JRZ9 810 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 DPYSL3Q14195 570 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 CYTH1Q15438 398 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 SLC22A6Q4U2R8 563 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 CARD16Q5EG05 197 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 FAM219BQ5XKK7 198 aa4.06□□□□□ -1.76
LSM5-206ENST00000409987 REP15Q6BDI9 236 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms