RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 FOXF1Q12946 379 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 ACKR1Q16570 336 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 NTRK2Q16620 822 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 FAM131AQ6UXB0 335 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 PM20D2Q8IYS1 436 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 SMIM19Q96E16 107 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 SPACA9Q96E40 222 aaPredicted RBP18.7■□□□□ 0.58
USP39-203ENST00000409470 ATF6BQ99941 703 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 C14orf119Q9NWQ9 140 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 TRAPPC4Q9Y296 219 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 WIF1Q9Y5W5 379 aa18.7■□□□□ 0.58
USP39-203ENST00000409470 TRBV2A0A0J9YWF9 115 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 LNP1A1A4G5 178 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 FUOMA2VDF0 154 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 TRIM3O75382 744 aaPredicted RBP18.69■□□□□ 0.58
USP39-203ENST00000409470 ACSM3Q53FZ2 586 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 FAM27D1Q5T7N8 215 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 RPL22L1Q6P5R6 122 aaKnown RBP18.69■□□□□ 0.58
USP39-203ENST00000409470 ADAD1Q96M93 576 aaKnown RBP18.69■□□□□ 0.58
USP39-203ENST00000409470 RNF32Q9H0A6 362 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 ZNF700Q9H0M5 742 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 PPIL3Q9H2H8 161 aaKnown RBP18.69■□□□□ 0.58
USP39-203ENST00000409470 MRPL39Q9NYK5 338 aaKnown RBP18.69■□□□□ 0.58
USP39-203ENST00000409470 B3GALT1Q9Y5Z6 326 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 TVP23AA6NH52 213 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 PSMD9O00233 223 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 SERPINA3P01011 423 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 CELA2AP08217 269 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 PSMB10P40306 273 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 PTGDSP41222 190 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 BCAP31P51572 246 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 DEFA1P59665 94 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 DEFA3P59666 94 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 PPP3R1P63098 170 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 EXT1Q16394 746 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 DCAF12Q5T6F0 453 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 EEF1A1P5Q5VTE0 462 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 MZT2AQ6P582 158 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 OR2Y1Q8NGV0 311 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 TXNIPQ9H3M7 391 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 HRH3Q9Y5N1 445 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 HS3ST3B1Q9Y662 390 aa18.69■□□□□ 0.58
USP39-203ENST00000409470 KIF26BQ2KJY2 2108 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 NCOR1O75376 2440 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 WDFY4Q6ZS81 3184 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 FABP12A6NFH5 140 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 ITGA10O75578 1167 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 COX6A1P12074 109 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 CFL1P23528 166 aaKnown RBP18.68■□□□□ 0.58
USP39-203ENST00000409470 AZGP1P25311 298 aaKnown RBP18.68■□□□□ 0.58
USP39-203ENST00000409470 FOLR3P41439 243 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 ZMAT1Q5H9K5 638 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 ZNF517Q6ZMY9 492 aaPredicted RBP18.68■□□□□ 0.58
USP39-203ENST00000409470 TIGD4Q8IY51 512 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 OR13C5Q8NGS8 318 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 DDIT4LQ96D03 193 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 LOXL4Q96JB6 756 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 ARL5BQ96KC2 179 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 SP140LQ9H930 580 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 PCDHGA5Q9Y5G8 931 aa18.68■□□□□ 0.58
USP39-203ENST00000409470 SHISA8B8ZZ34 492 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 FTCDNL1E5RQL4 147 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 TFPIP10646 304 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 IL11P20809 199 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 OR7A5Q15622 319 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 ZNF79Q15937 498 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 CCDC58Q4VC31 144 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 ZNF248Q8NDW4 579 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 OR6S1Q8NH40 331 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 IMMP1LQ96LU5 166 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 LOXL2Q9Y4K0 774 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 PRSS37A4D1T9 235 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 TP53I11O14683 189 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 HPGDSO60760 199 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 SC5DO75845 299 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 CASP3P42574 277 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 MFSD13AQ14CX5 517 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 IDNKQ5T6J7 187 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 FAM220AQ7Z4H9 259 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 PXKQ7Z7A4 578 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 OR6N2Q8NGY6 317 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 MFSD8Q8NHS3 518 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 ZNF519Q8TB69 540 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 HTRA1Q92743 480 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 PPP1R14BQ96C90 147 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 NXPE2Q96DL1 559 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 SRRQ9GZT4 340 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 LAMP5Q9UJQ1 280 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 BDP1A6H8Y1 2624 aa18.67■□□□□ 0.58
USP39-203ENST00000409470 IGLV3-32A0A0A0MS00 114 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 ZNF208O43345 1280 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 DLGAP3O95886 979 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 TACSTD2P09758 323 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 TCEA1P23193 301 aaKnown RBP18.66■□□□□ 0.58
USP39-203ENST00000409470 CENPAP49450 140 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 DLX5P56178 289 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 GLYR1Q49A26 553 aaPredicted RBP18.66■□□□□ 0.58
USP39-203ENST00000409470 PAMR1Q6UXH9 720 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 CDC20BQ86Y33 519 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 MRGPRX4Q96LA9 322 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms