RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 RNASE12Q5GAN4 147 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 C10orf91Q5T1B1 145 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3GQ6DHY5 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3CQ6IPX1 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ADNP2Q6IQ32 1131 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 GTF2H2CQ6P1K8 395 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 SCIMPQ6UWF3 145 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ALKAL1Q6UXT8 129 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 Q6ZPB1 254 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 MOB3CQ70IA8 216 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 GOLGA7Q7Z5G4 137 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ACOT1Q86TX2 421 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 LDLRAD3Q86YD5 345 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 MARCH9Q86YJ5 346 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 DCUN1D3Q8IWE4 304 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 FAM217AQ8IXS0 508 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3Q8IZP1 549 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 PUSL1Q8N0Z8 303 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 THEM5Q8N1Q8 247 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 LINC00471Q8N535 108 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 NPWQ8N729 165 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 LRRC52Q8N7C0 313 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 L3MBTL4Q8NA19 623 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 POMGNT2Q8NAT1 580 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 SYT14Q8NB59 555 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 FAM98AQ8NCA5 519 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 AKR7LQ8NHP1 331 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 C15orf40Q8WUR7 153 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 OSTF1Q92882 214 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ARL11Q969Q4 196 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 KTI12Q96EK9 354 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 CMTM3Q96MX0 182 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 MTERF1Q99551 399 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 CMSS1Q9BQ75 279 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 SEC11CQ9BY50 192 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 POLDIP3Q9BY77 421 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 CDT1Q9H211 546 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CDCP1Q9H5V8 836 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 REEP4Q9H6H4 257 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 NANSQ9NR45 359 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 SMCO4Q9NRQ5 59 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 SLC22A11Q9NSA0 550 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 OR6C2Q9NZP2 312 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ZNF629Q9UEG4 869 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 ZNF225Q9UK10 706 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 FBXL3Q9UKT7 428 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ST3GAL5Q9UNP4 418 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 NEU3Q9UQ49 428 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 SLC9A8Q9Y2E8 581 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TRIP11Q15643 1979 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 LCTP09848 1927 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 PCNX1Q96RV3 2341 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ANK1P16157 1881 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 DSPPQ9NZW4 1301 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 NAV3Q8IVL0 2385 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 SDK1Q7Z5N4 2213 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 KANTRA0A1W2PQU2 76 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 C9orf170A2RU37 121 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 ANKRD61A6NGH8 418 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 E9PI62 339 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 F5H5P2 479 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 STMND1H3BQB6 276 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 TMEM189-UBE2V1I3L0A0 370 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 J3KRW8 73 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 FAAHO00519 579 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 NDUFS3O75489 264 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 FGF1P05230 155 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 EDN1P05305 212 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 SERPIND1P05546 499 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 GKN3PP0CG01 181 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 STAG3L1P0CL83 205 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 ACP2P11117 423 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 BCKDHAP12694 445 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 GNSP15586 552 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 HLA-DPA1P20036 260 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 PSMB1P20618 241 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 DUSP1P28562 367 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 PTPN6P29350 595 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 PRDX3P30048 256 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 HTR6P50406 440 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CCR5P51681 352 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CCR9P51686 369 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 SNRPEP62304 92 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 VAMP2P63027 116 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 RAE1P78406 368 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 MRPS10P82664 201 aaKnown RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 BIKQ13323 160 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 COTL1Q14019 142 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 HNF4GQ14541 408 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 PTPRCAPQ14761 206 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 FAM74A1Q5RGS3 127 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 IDNKQ5T6J7 187 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 ANXA8L1Q5VT79 327 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 ZNF660Q6AZW8 331 aaPredicted RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 HIST2H2BCQ6DN03 193 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 CDC73Q6P1J9 531 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 SLC27A1Q6PCB7 646 aa4.97□□□□□ -1.61
CLK1-202ENST00000409403 GLDNQ6ZMI3 551 aaPredicted RBP4.97□□□□□ -1.61
CLK1-202ENST00000409403 TMPRSS11FQ6ZWK6 438 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms