RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CALCRP30988 508 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 IL2RGP31785 369 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 GLRXP35754 106 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 CLDN17P56750 224 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 MRPS11P82912 194 aaKnown RBP6.68□□□□□ -1.34
LSM5-202ENST00000409292 HGFACQ04756 655 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 IFFO1Q0D2I5 559 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 MFSD13AQ14CX5 517 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 TRIP10Q15642 601 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 NKPD1Q17RQ9 610 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 GSG1Q2KHT4 349 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 PCGF3Q3KNV8 242 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 UGT3A2Q3SY77 523 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 GLIPR1L2Q4G1C9 344 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 SAXO2Q658L1 398 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 ATG16L1Q676U5 607 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 KRT80Q6KB66 452 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 TMEM154Q6P9G4 183 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 OLIG3Q7RTU3 272 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 NET1Q7Z628 596 aaPredicted RBP6.68□□□□□ -1.34
LSM5-202ENST00000409292 HMGN2P46Q86SG4 172 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 ANKRD46Q86W74 232 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 RNF130Q86XS8 419 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 RIBC1Q8N443 379 aaPredicted RBP6.68□□□□□ -1.34
LSM5-202ENST00000409292 ZIC4Q8N9L1 334 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 SEMA6DQ8NFY4 1073 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 OR52P1PQ8NH57 321 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 CLDND2Q8NHS1 167 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 MFSD8Q8NHS3 518 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 MRPL24Q96A35 216 aaKnown RBP6.68□□□□□ -1.34
LSM5-202ENST00000409292 TESCQ96BS2 214 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 OXGR1Q96P68 337 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 SOX7Q9BT81 388 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 NOX3Q9HBY0 568 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 MKS1Q9NXB0 559 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 THUMPD1Q9NXG2 353 aaKnown RBP6.68□□□□□ -1.34
LSM5-202ENST00000409292 P2RX2Q9UBL9 471 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 DUSP13Q9UII6 198 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 DYSFO75923 2080 aa6.68□□□□□ -1.34
LSM5-202ENST00000409292 ZC3H12DA2A288 527 aaKnown RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 CCDC154A6NI56 674 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 CLDN24A6NM45 220 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 ZNF726A6NNF4 738 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 ZNF99A8MXY4 864 aaPredicted RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 E9PBE3 544 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 HMGN4O00479 90 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 AIM2O14862 343 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 FRS3O43559 492 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 UBL3O95164 117 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 ANP32DO95626 131 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 GAAP10253 952 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 NQO1P15559 274 aaKnown RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 EGR1P18146 543 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 RAD52P43351 418 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 CRISP3P54108 245 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 CAMK2DQ13557 499 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 CEACAM16Q2WEN9 425 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 FAM209AQ5JX71 171 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 UNQ6126/PRO20091Q6UXV3 157 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 ZNF621Q6ZSS3 439 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 MDP1Q86V88 176 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 LRRC34Q8IZ02 419 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 CDK20Q8IZL9 346 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 ZCCHC24Q8N2G6 241 aaKnown RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 C17orf53Q8N3J3 647 aaPredicted RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 ANKFN1Q8N957 763 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 EIF1ADQ8N9N8 165 aaKnown RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 CPEB3Q8NE35 698 aaKnown RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 OR6N1Q8NGY5 312 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 KIF18AQ8NI77 898 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 RAB1CQ92928 201 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 SLC38A4Q969I6 547 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 TMPRSS13Q9BYE2 586 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 LRMDAQ9H2I8 198 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 ZMAT3Q9HA38 289 aaKnown RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 GPR35Q9HC97 309 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 DECR2Q9NUI1 292 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 SLCO1C1Q9NYB5 712 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 TREM2Q9NZC2 230 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 EGFL7Q9UHF1 273 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 SLC7A8Q9UHI5 535 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 BTNL2Q9UIR0 455 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 IFT52Q9Y366 437 aa6.67□□□□□ -1.34
LSM5-202ENST00000409292 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
LSM5-202ENST00000409292 CDHR4A6H8M9 788 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
LSM5-202ENST00000409292 LYNX1G3V0Z9 82 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 MPZL1O95297 269 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 FARS2O95363 451 aaKnown RBP6.66□□□□□ -1.34
LSM5-202ENST00000409292 PTHP01270 115 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 LYNX1P0DP58 116 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 PNMTP11086 282 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 LBPP18428 481 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 TCN1P20061 433 aaPredicted RBP6.66□□□□□ -1.34
LSM5-202ENST00000409292 DRD4P21917 467 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 NCALDP61601 193 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 SLC3A1Q07837 685 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 CASP8Q14790 479 aa6.66□□□□□ -1.34
LSM5-202ENST00000409292 PDCD2Q16342 344 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms