RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 PTGR1Q14914 329 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 LSM12Q3MHD2 195 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 TMEM225Q6GV28 225 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 LEG1Q6P5S2 330 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF837Q96EG3 531 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 SLC35G5Q96KT7 338 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 TMEM120AQ9BXJ8 343 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 LRMDAQ9H2I8 198 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 OR51I1Q9H343 314 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 ATAD3AQ9NVI7 634 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 ADPRHL2Q9NX46 363 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 PDP1Q9P0J1 537 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 GIMAP2Q9UG22 337 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 A0A0G2JND7 137 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 FRS3O43559 492 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 ALX3O95076 343 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 MYL2P10916 166 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 CPA3P15088 417 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 NQO1P15559 274 aaKnown RBP10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 CAPZA2P47755 286 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 BAMBIQ13145 260 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 CEACAM16Q2WEN9 425 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 PRAMEF8Q5VWM4 474 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 PRAMEF7Q5VXH5 474 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 C6orf120Q7Z4R8 191 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 KRTCAP2Q8N6L1 136 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 COQ8BQ96D53 544 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 MMP27Q9H306 513 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 EXD2Q9NVH0 621 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF69Q9UC07 566 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
CHRNA1-203ENST00000409219 RNF103-CHMP3A0A140T963 221 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 TMEM114B3SHH9 223 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 AZIN1O14977 448 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 MGRN1O60291 552 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 SCN2BO60939 215 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 VAMP5O95183 116 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 CHRM4P08173 479 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 GUSBP08236 651 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 OR12D1P0DN82 309 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 T-ENOLP0DO92 83 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 ZNF35P13682 527 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 SLC1A6P48664 564 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 RASSF2P50749 326 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 ELF3P78545 371 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 RIPK1Q13546 671 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 KRT72Q14CN4 511 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 FXNQ16595 210 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 CFAP157Q5JU67 520 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 C10orf107Q8IVU9 208 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 MIPOL1Q8TD10 442 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 WFDC12Q8WWY7 111 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 RAB8BQ92930 207 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 SLC25A28Q96A46 364 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 ZNF75AQ96N20 296 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 C20orf27Q9GZN8 174 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 GPR35Q9HC97 309 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 POLE3Q9NRF9 147 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 B3GNT2Q9NY97 397 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 NOX1Q9Y5S8 564 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 DNAJC15Q9Y5T4 150 aa10.95□□□□□ -0.66
CHRNA1-203ENST00000409219 A0A1W2PPW3 197 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 FAAHO00519 579 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 ZNF432O94892 652 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 HLA-HP01893 362 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 ZNF14P17017 642 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 CLDN17P56750 224 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 DNAJB13P59910 316 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 RPS23P62266 143 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 CCL8P80075 99 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 LCN2P80188 198 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 BNIP2Q12982 314 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 KLF17Q5JT82 389 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 KANK2Q63ZY3 851 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 TNFAIP8L2Q6P589 184 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 C1QL4Q86Z23 238 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 CLECL1Q8IZS7 167 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 NATD1Q8N6N6 113 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 DEFB108BQ8NET1 73 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 XAGE5Q8WWM1 108 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 ROPN1LQ96C74 230 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 SORT1Q99523 831 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 GPA33Q99795 319 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 TAPBPLQ9BX59 468 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 NUP50Q9UKX7 468 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 ZNF346Q9UL40 294 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 RCE1Q9Y256 329 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 RASD1Q9Y272 281 aa10.94□□□□□ -0.66
CHRNA1-203ENST00000409219 PRAMEF27A3QJZ7 478 aa10.93□□□□□ -0.66
CHRNA1-203ENST00000409219 TMEM233B4DJY2 109 aa10.93□□□□□ -0.66
CHRNA1-203ENST00000409219 CLDN34H7C241 214 aa10.93□□□□□ -0.66
CHRNA1-203ENST00000409219 ITM2AO43736 263 aa10.93□□□□□ -0.66
CHRNA1-203ENST00000409219 TRIM13O60858 407 aa10.93□□□□□ -0.66
CHRNA1-203ENST00000409219 OMGP23515 440 aa10.93□□□□□ -0.66
CHRNA1-203ENST00000409219 ABCE1P61221 599 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-203ENST00000409219 EPS8Q12929 822 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms