RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 B3GNT3Q9Y2A9 372 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 A0A096LPE4 126 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 A0A1W2PNR3 127 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 A0A1W2PPZ6 126 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 C5orf49A4QMS7 147 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 H7C1Q1 480 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 DENRO43583 198 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 XPNPEP2O43895 674 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 UBL3O95164 117 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TMIGD3P0DMS9 266 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 PTGER4P35408 488 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 AGFG1P52594 562 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TMBIM6P55061 237 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 SOX8P57073 446 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ACTBP60709 375 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 RPL27P61353 136 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ACTG1P63261 375 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 SPOCK1Q08629 439 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 RNPS1Q15287 305 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 P2RY14Q15391 338 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 EIF2S3LQ2VIR3 472 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 RNASE10Q5GAN6 216 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 EIF5AL1Q6IS14 154 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ANKRD16Q6P6B7 361 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GDF7Q7Z4P5 450 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 PRSS42Q7Z5A4 293 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 LINC00346Q8IVM7 164 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TOMM40LQ969M1 308 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 C4orf36Q96KX1 117 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 SLC30A2Q9BRI3 323 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 CENPOQ9BU64 300 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF286AQ9HBT8 521 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 PIGLQ9Y2B2 252 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TRAV18A0A075B6X5 111 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 J3KTA2 159 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 SYT5O00445 386 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 HSPB6O14558 160 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 AHCYL1O43865 530 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GM2AP17900 193 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 NFYBP25208 207 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 CX3CR1P49238 355 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 IST1P53990 364 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 SUMO3P55854 103 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 NFATC3Q12968 1075 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TSPAN31Q12999 210 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 EDDM3AQ14507 147 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 DUSP5Q16690 384 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GLYR1Q49A26 553 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TMEM215Q68D42 235 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 PWWP2BQ6NUJ5 590 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 OVCH1Q7RTY7 1134 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GLB1L2Q8IW92 636 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 DTWD1Q8N5C7 304 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 DMBX1Q8NFW5 382 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 C16orf52Q8NHV5 167 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ASB5Q8WWX0 329 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 SORT1Q99523 831 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 OCSTAMPQ9BR26 566 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 EGLN3Q9H6Z9 239 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TMEM9Q9P0T7 183 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 KIAA1456Q9P272 454 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TCFL5Q9UL49 500 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 EMCNQ9ULC0 261 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GSTP1P09211 210 aaKnown RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 FBXO45P0C2W1 286 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 FAM157BP0CG42 384 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GABRB3P28472 473 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 TGM4P49221 684 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 HOXA1P49639 335 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF81P51508 661 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 NUBP1P53384 320 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 RAB40BQ12829 278 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 CATR1Q13166 79 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GRK1Q15835 563 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 PRTGQ2VWP7 1150 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ALKBH6Q3KRA9 238 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF718Q3SXZ3 478 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GLYATL2Q8WU03 294 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 HAS2Q92819 552 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF419Q96HQ0 510 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 OR2A14Q96R47 310 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 SLC25A18Q9H1K4 315 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GORASP2Q9H8Y8 452 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ALG5Q9Y673 324 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 COL4A5P29400 1685 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 A0A087WV62 115 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 IGHV5-10-1A0A0J9YXX1 117 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 OR5H15A6NDH6 313 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 CLDN24A6NM45 220 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 CCL21O00585 134 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 QDPRP09417 244 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF182P17025 639 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-203ENST00000409101 CPT2P23786 658 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 F2RL1P55085 397 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 GABARAPL2P60520 117 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 FHL5Q5TD97 284 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ESPNLQ6ZVH7 1005 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 ABI3BPQ7Z7G0 1075 aa4.6□□□□□ -1.67
SCN3A-203ENST00000409101 CLDN22Q8N7P3 220 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms