RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 LIPNQ5VXI9 398 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 PLCZ1Q86YW0 608 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 IZUMO1Q8IYV9 350 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 CMTM4Q8IZR5 234 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 ZNF433Q8N7K0 673 aaPredicted RBP15.29■□□□□ 0.04
NUP50-203ENST00000407019 DAZLQ92904 295 aaKnown RBP15.29■□□□□ 0.04
NUP50-203ENST00000407019 SCMH1Q96GD3 660 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 GTPBP2Q9BX10 602 aaKnown RBP15.29■□□□□ 0.04
NUP50-203ENST00000407019 ANKRD10Q9NXR5 420 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 COPZ2Q9P299 210 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 A0A1B0GTQ1 180 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 A0A1W2PQD3 144 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 C7orf66A4D0T2 115 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 TVP23AA6NH52 213 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 CENPBD1B2RD01 187 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 NDUFB5O43674 189 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 TSPAN2O60636 221 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 PIAS2O75928 621 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 EFNA3P52797 238 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 PLCXD2Q0VAA5 305 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 MARCH3Q86UD3 253 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 OR6V1Q8N148 313 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 OR5AK2Q8NH90 309 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 SMIM4Q8WVI0 70 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 MAP6Q96JE9 813 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 MNTQ99583 582 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 TSPAN10Q9H1Z9 355 aaPredicted RBP15.28■□□□□ 0.04
NUP50-203ENST00000407019 MED28Q9H204 178 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 ZNF304Q9HCX3 659 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 LAMP5Q9UJQ1 280 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 V9GY05 133 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 TO15178 435 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 ARHGEF9O43307 516 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 DUX1O43812 170 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 CDC40O60508 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
NUP50-203ENST00000407019 EIF4E2O60573 245 aaKnown RBP15.28■□□□□ 0.04
NUP50-203ENST00000407019 ABHD16AO95870 558 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 BGLAPP02818 100 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 PRKCAP17252 672 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 GIFP27352 417 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 MAPK3P27361 379 aaPredicted RBP15.28■□□□□ 0.04
NUP50-203ENST00000407019 MAGEB1P43366 347 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 NSDHLQ15738 373 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 VWA2Q5GFL6 755 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 FAM199XQ6PEV8 388 aaPredicted RBP15.28■□□□□ 0.04
NUP50-203ENST00000407019 POMZP3Q6PJE2 187 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 PRSS45Q7RTY3 260 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 PLXDC1Q8IUK5 500 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 OR6N2Q8NGY6 317 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 CACNG6Q9BXT2 260 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 GON7Q9BXV9 100 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 TBL1XR1Q9BZK7 514 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 SLITRK2Q9H156 845 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 COPS7AQ9UBW8 275 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 IKZF2Q9UKS7 526 aa15.28■□□□□ 0.04
NUP50-203ENST00000407019 EYSQ5T1H1 3165 aa15.27■□□□□ 0.04
NUP50-203ENST00000407019 TRAV36DV7A0A075B6V5 113 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 ALG1L2C9J202 215 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 NUDT14O95848 222 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 DPP4P27487 766 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 DYRK1AQ13627 763 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 KLF9Q13886 244 aaPredicted RBP15.27■□□□□ 0.03
NUP50-203ENST00000407019 TOMM34Q15785 309 aaPredicted RBP15.27■□□□□ 0.03
NUP50-203ENST00000407019 Q499Y3 187 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 ARHGAP40Q5TG30 622 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 EEF1A1P5Q5VTE0 462 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 LINGO2Q7L985 606 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 SLC29A4Q7RTT9 530 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 PRSS58Q8IYP2 241 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 D2HGDHQ8N465 521 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 OMA1Q96E52 524 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 KLHL15Q96M94 604 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 ELF4Q99607 663 aaPredicted RBP15.27■□□□□ 0.03
NUP50-203ENST00000407019 WWTR1Q9GZV5 400 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 GHITMQ9H3K2 345 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 AUNIPQ9H7T9 357 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 WDR76Q9H967 626 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 TCF7L1Q9HCS4 588 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 FRRS1LQ9P0K9 344 aa15.27■□□□□ 0.03
NUP50-203ENST00000407019 A0A087WV48 116 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 TRABD2BA6NFA1 517 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 SMLR1H3BR10 107 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 KHNYNO15037 678 aaKnown RBP15.26■□□□□ 0.03
NUP50-203ENST00000407019 AKR7A3O95154 331 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 ADRB1P08588 477 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 GP1BBP13224 206 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 FOLR1P15328 257 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 PGCP20142 388 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 STOMP27105 288 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 CSNK1EP49674 416 aaKnown RBP15.26■□□□□ 0.03
NUP50-203ENST00000407019 CFHR1Q03591 330 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 FCN2Q15485 313 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 SLC22A10Q63ZE4 541 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 GRPEL2Q8TAA5 225 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 SLC25A38Q96DW6 304 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 MRI1Q9BV20 369 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 SYT4Q9H2B2 425 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 LIN7BQ9HAP6 207 aa15.26■□□□□ 0.03
NUP50-203ENST00000407019 COL5A1P20908 1838 aaPredicted RBP15.26■□□□□ 0.03
NUP50-203ENST00000407019 TRBV5-5A0A0J9YX44 114 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms