RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 DHODHQ02127 395 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 PON3Q15166 354 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 ELFN2Q5R3F8 820 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 COL13A1Q5TAT6 717 aaPredicted RBP8.94□□□□□ -0.98
MSH2-202ENST00000406134 OTPQ5XKR4 325 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 MED25Q71SY5 747 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 OR6K6Q8NGW6 343 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 ZNF431Q8TF32 576 aaPredicted RBP8.94□□□□□ -0.98
MSH2-202ENST00000406134 SNX33Q8WV41 574 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 ADIPOR1Q96A54 375 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 C7orf50Q9BRJ6 194 aaKnown RBP8.94□□□□□ -0.98
MSH2-202ENST00000406134 FBXL3Q9UKT7 428 aa8.94□□□□□ -0.98
MSH2-202ENST00000406134 MRPS7Q9Y2R9 242 aaKnown RBP8.94□□□□□ -0.98
MSH2-202ENST00000406134 RP1P56715 2156 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 OR4C45A6NMZ5 311 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 GABARAPH6UMI1 98 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 SLC22A5O76082 557 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 NSA2O95478 260 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 TGM6O95932 706 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 UBL4AP11441 157 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 CDK2P24941 298 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 VEGFCP49767 419 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 GPR139Q6DWJ6 353 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 SLC16A9Q7RTY1 509 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 FGD2Q7Z6J4 655 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 OOSP2Q86WS3 158 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 TMEM151BQ8IW70 566 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 LSM14AQ8ND56 463 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 OR56B4Q8NH76 319 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 MRPL39Q9NYK5 338 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 COPZ2Q9P299 210 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 ZSCAN5BA6NJL1 495 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 TSPAN9O75954 239 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 DHFRP00374 187 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 F13BP05160 661 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 RNH1P13489 461 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 SSTR2P30874 369 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 SDHAP31040 664 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 DCTDP32321 178 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 PITPNAQ00169 270 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 HSF2Q03933 536 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 RPL18Q07020 188 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 TOMM34Q15785 309 aaPredicted RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 C2orf68Q2NKX9 166 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 TOR2AQ5JU69 321 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 SFRP4Q6FHJ7 346 aaPredicted RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 Q6ZS52 159 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 SLC35F3Q8IY50 421 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 OR6C4Q8NGE1 309 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 ZDHHC1Q8WTX9 485 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 TAAR8Q969N4 342 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 PTDSS2Q9BVG9 487 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 ADAM19Q9H013 955 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 KCNK15Q9H427 330 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 RPS6KB2Q9UBS0 482 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 CD207Q9UJ71 328 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 ZNF222Q9UK12 451 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 MMP17Q9ULZ9 603 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 ALPK2Q86TB3 2170 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 FREM3P0C091 2139 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 CIB4A0PJX0 185 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 FITM1A5D6W6 292 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 PRAMEF26H0Y7S4 382 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 IGKV3-11P04433 115 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 RAD52P43351 418 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 EFNB2P52799 333 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 MRPL28Q13084 256 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 SNTB2Q13425 540 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 KCNAB1Q14722 419 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 LINC00303Q3SY05 128 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 LIPNQ5VXI9 398 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 BAIAP2L2Q6UXY1 529 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 DND1Q8IYX4 353 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 HMGB4Q8WW32 186 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 PHYHIPQ92561 330 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 MCHR2Q969V1 340 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 CCDC74AQ96AQ1 378 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 HAVCR1Q96D42 359 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 G6PC3Q9BUM1 346 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 ZNF436Q9C0F3 470 aaPredicted RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 RANBP3Q9H6Z4 567 aaPredicted RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 Q9N2J8 555 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 EXOSC3Q9NQT5 275 aaKnown RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 PRTFDC1Q9NRG1 225 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 TAS2R5Q9NYW4 299 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 ING1Q9UK53 422 aaPredicted RBP8.93□□□□□ -0.98
MSH2-202ENST00000406134 RHBDD3Q9Y3P4 386 aa8.93□□□□□ -0.98
MSH2-202ENST00000406134 IGKV3D-11A0A0A0MRZ8 115 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 IGHV5-51A0A0C4DH38 117 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 OR2M5A3KFT3 312 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 PEX14O75381 377 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 APEHP13798 732 aaKnown RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 DRD1P21728 446 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 GFERP55789 205 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 PUDPQ08623 228 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 C1QL3Q5VWW1 255 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 SLC22A10Q63ZE4 541 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 GLB1L2Q8IW92 636 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 OR4D10Q8NGI6 311 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms