RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 SPHK2Q9NRA0 654 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 NKIRAS2Q9NYR9 191 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 CASP8AP2Q9UKL3 1982 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 TRAV1-2A0A0B4J238 106 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 J3QLW9 94 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 CTDSPLO15194 276 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 CD2P06729 351 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZGLP1P0C6A0 271 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZNF19P17023 458 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 NRG3P56975 720 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 MELKQ14680 651 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 OR52W1Q6IF63 320 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZNF613Q6PF04 617 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZNF793Q6ZN11 406 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 TMPRSS11FQ6ZWK6 438 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 SLC39A11Q8N1S5 342 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 NUP43Q8NFH3 380 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 OR5K2Q8NHB8 316 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 CNRIP1Q96F85 164 aaPredicted RBP14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 HMX1Q9NP08 348 aaPredicted RBP14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 LUZP4Q9P127 313 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 SLC7A7Q9UM01 511 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 OR10H1Q9Y4A9 318 aa14.86□□□□□ -0.03
COL4A3BP-204ENST00000405807 SNRPBP14678 240 aaKnown RBP14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 BMP7P18075 431 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 CSNK2A2P19784 350 aaPredicted RBP14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 ACVR1BP36896 505 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 RBX1P62877 108 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 DHODHQ02127 395 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 MAPK14Q16539 360 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZNF750Q32MQ0 723 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 TMEM255AQ5JRV8 349 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 FAM69AQ5T7M9 428 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 GSG1LQ6UXU4 331 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 AMZ2Q86W34 360 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 C17orf47Q8NEP4 570 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 OR51Q1Q8NH59 317 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 C22orf15Q8WYQ4 148 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 C3orf49Q96BT1 292 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 ARL6Q9H0F7 186 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 SLC25A32Q9H2D1 315 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 WDR26Q9H7D7 661 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 ABHD14A-ACY1A0A1B0GW23 586 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 FAM86C2PA6NEL3 165 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 NME1P15531 152 aaKnown RBP14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 PPP3CBP16298 524 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 SLC16A1P53985 500 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 BLOC1S1P78537 153 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 EGR3Q06889 387 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 UBXN2BQ14CS0 331 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZNF660Q6AZW8 331 aaPredicted RBP14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 FAM98AQ8NCA5 519 aaKnown RBP14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 CXorf40AQ8TE69 158 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 SMIM4Q8WVI0 70 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 KISS1RQ969F8 398 aaPredicted RBP14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 C4orf36Q96KX1 117 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 TEAD3Q99594 435 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 CACYBPQ9HB71 228 aaKnown RBP14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 THSD7BQ9C0I4 1608 aa14.85□□□□□ -0.03
COL4A3BP-204ENST00000405807 DUXAA6NLW8 204 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 PRR23D1E9PI22 279 aaPredicted RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 SUSD5O60279 629 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 TFP02787 698 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 PRR23D2P0DMB1 279 aaPredicted RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 C8orf89P0DMQ9 161 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 TMIGD3P0DMS9 266 aaPredicted RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 EPXP11678 715 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 ATF1P18846 271 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 GDNFP39905 211 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 CSNK1G2P78368 415 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 DMRTA1Q5VZB9 504 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 LPCAT3Q6P1A2 487 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.84□□□□□ -0.034e-6■■■■□ 19.8
COL4A3BP-204ENST00000405807 TMUB2Q71RG4 321 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 GHSRQ92847 366 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 PGLYRP3Q96LB9 341 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 CD180Q99467 661 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 TRMT61BQ9BVS5 477 aaKnown RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 HCAR1Q9BXC0 346 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 C2orf42Q9NWW7 574 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 SPDEFO95238 335 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 TEAD1P28347 426 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 LY6G5CQ5SRR4 150 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 DMKNQ6E0U4 476 aaPredicted RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 PRSS45Q7RTY3 260 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 FAM71CQ8NEG0 241 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 OR4D9Q8NGE8 314 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 STOML3Q8TAV4 291 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 THAP4Q8WY91 577 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 SCLYQ96I15 445 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 NAA11Q9BSU3 229 aaPredicted RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 MOKQ9UQ07 419 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 A0A1W2PR48 441 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 BHLHE40O14503 412 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 FLRT2O43155 660 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 FCMRO60667 390 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 ASGR2P07307 311 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 PSMB1P20618 241 aaKnown RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 S100A2P29034 98 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 DUSP2Q05923 314 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms