RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ADORA3P0DMS8 318 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 PCSK6P29122 969 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 PRPS1P60891 318 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 SIRPAP78324 504 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 SLC17A1Q14916 467 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 POU4F3Q15319 338 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 MICAQ29983 383 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 TBPL2Q6SJ96 375 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 PLXDC2Q6UX71 529 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 TMPRSS11FQ6ZWK6 438 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 PXKQ7Z7A4 578 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 CCDC103Q8IW40 242 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 UEVLDQ8IX04 471 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 ZNF100Q8IYN0 542 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 OR9K2Q8NGE7 335 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 FAM46AQ96IP4 442 aaKnown RBP9.37□□□□□ -0.91
RPAIN-204ENST00000405578 MOGAT1Q96PD6 335 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 PSD2Q9BQI7 771 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 CLEC4MQ9H2X3 399 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-204ENST00000405578 ZNF556Q9HAH1 456 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 C20orf141Q9NUB4 165 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 Q9UFV3 132 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 PROCRQ9UNN8 238 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 NOSIPQ9Y314 301 aaKnown RBP9.37□□□□□ -0.91
RPAIN-204ENST00000405578 U3KQV3 271 aa9.37□□□□□ -0.91
RPAIN-204ENST00000405578 A0A1W2PRG6 482 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 OR6C65A6NJZ3 312 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 ZNF716A6NP11 495 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 EEF1E1-BLOC1S5C9J1V9 151 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 EEF1E1O43324 174 aaKnown RBP9.36□□□□□ -0.91
RPAIN-204ENST00000405578 PIP5K1CO60331 668 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
RPAIN-204ENST00000405578 CD8BP10966 210 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 FPR3P25089 353 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 AGTR1P30556 359 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 GPR4P46093 362 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 LIMS1P48059 325 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 FOXF2Q12947 444 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 SEC23BQ15437 767 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 ATP6AP1Q15904 470 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 SLC46A3Q7Z3Q1 461 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 HDDC2Q7Z4H3 204 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 TUSC5Q8IXB3 177 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 LRRC17Q8N6Y2 441 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 GNPDA2Q8TDQ7 276 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 GIPC3Q8TF64 312 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 PYDC1Q8WXC3 89 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 SLCO4A1Q96BD0 722 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 NRBF2Q96F24 287 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 STX18Q9P2W9 335 aaKnown RBP9.36□□□□□ -0.91
RPAIN-204ENST00000405578 MGAT4BQ9UQ53 548 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 MPDZO75970 2070 aa9.36□□□□□ -0.91
RPAIN-204ENST00000405578 ARHGAP21Q5T5U3 1957 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 EML6Q6ZMW3 1958 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ARRDC5A6NEK1 342 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 UNC119BA6NIH7 251 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ZNF726A6NNF4 738 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ZNF814B7Z6K7 855 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 MCIDASD6RGH6 385 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 C11orf98E9PRG8 122 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 H0YHG0 523 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 MSTNO14793 375 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ENTPD5O75356 428 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 SERPINI2O75830 405 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 TNFSF13O75888 250 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 KRT33AO76009 404 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 MAKP20794 623 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 GSTM3P21266 225 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 RPL4P36578 427 aaKnown RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 KIR2DL2P43627 348 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 OMPP47874 163 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 DAP3P51398 398 aaKnown RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 POU3F1Q03052 451 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ZP4Q12836 540 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 COX10Q12887 443 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ZBED5Q49AG3 693 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ALG10Q5BKT4 473 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 RPL13AP3Q6NVV1 102 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 C1orf94Q6P1W5 598 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 SHQ1Q6PI26 577 aaKnown RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 PAMR1Q6UXH9 720 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 CASP12Q6UXS9 341 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 CREB3L2Q70SY1 520 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 AAED1Q7RTV5 226 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ZER1Q7Z7L7 766 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 HIPK1Q86Z02 1210 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ZDHHC13Q8IUH4 622 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 KDM8Q8N371 416 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 AQP11Q8NBQ7 271 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 NAXEQ8NCW5 288 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 OR10G2Q8NGC3 310 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 OR4C15Q8NGM1 316 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 OR51A7Q8NH64 312 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 TMEM45BQ96B21 275 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 APH1AQ96BI3 265 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ZNF775Q96BV0 537 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 MBD6Q96DN6 1003 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 STARD4Q96DR4 205 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms