RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ACSM1Q08AH1 577 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 TIMM50Q3ZCQ8 353 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 LYPD4Q6UWN0 246 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 KDM8Q8N371 416 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 DYNC2LI1Q8TCX1 351 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 SLC25A43Q8WUT9 341 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-205ENST00000401607 NXPE2Q96DL1 559 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ARHGEF9O43307 516 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 CBR3O75828 277 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 F10P00742 488 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ACVR1BP36896 505 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ACTC1P68032 377 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ACTA1P68133 377 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 OC90Q02509 493 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ATP1A1-AS1Q5TC04 95 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 OR6K6Q8NGW6 343 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 FER1L6-AS2Q96M78 137 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ALG12Q9BV10 488 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 DEPPQ9NTK1 212 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 TEKT2Q9UIF3 430 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 DKKL1Q9UK85 242 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 A0A1W2PNR3 127 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 A0A1W2PQL4 384 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-205ENST00000401607 FAM171A2A8MVW0 826 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 AKR7A3O95154 331 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 RENP00797 406 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 NAA10P41227 235 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-205ENST00000401607 TLE3Q04726 772 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 ABHD17BQ5VST6 288 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 ADCK1Q86TW2 530 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 RFLNBQ8N5W9 214 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 ZFAND2BQ8WV99 257 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 ZHX1-C8orf76Q96EF9 292 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 SYT4Q9H2B2 425 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 DLL3Q9NYJ7 618 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 MUC6Q6W4X9 2439 aa23.03■■□□□ 1.28
CPNE1-205ENST00000401607 LRRC3CA6NJW4 275 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 SELENOFO60613 162 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 LIPCP11150 499 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 UGT2B10P36537 528 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 CD96P40200 585 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 CRYBB2P43320 205 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 HCCSP53701 268 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 TMPRSS11AQ6ZMR5 421 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 SSX6Q7RTT6 188 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 KLBQ86Z14 1044 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 PM20D2Q8IYS1 436 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 OR6V1Q8N148 313 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 ZFP41Q8N8Y5 198 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 UFD1Q92890 307 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 TRMT61AQ96FX7 289 aaKnown RBP23.02■■□□□ 1.28
CPNE1-205ENST00000401607 OR5B2Q96R09 309 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 SNX18Q96RF0 628 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 DCSTAMPQ9H295 470 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 SRA1Q9HD15 236 aaKnown RBP23.02■■□□□ 1.28
CPNE1-205ENST00000401607 FANCFQ9NPI8 374 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 LRFN1Q9P244 771 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 MOKQ9UQ07 419 aa23.02■■□□□ 1.28
CPNE1-205ENST00000401607 PNMA8CA0A1B0GUJ8 204 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 XKRYO14609 159 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 LRRTM2O43300 516 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 FKBP2P26885 142 aaKnown RBP23.01■■□□□ 1.27
CPNE1-205ENST00000401607 SFTPDP35247 375 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 MELKQ14680 651 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 SLC35F2Q8IXU6 374 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 OR2T4Q8NH00 348 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 TBC1D15Q8TC07 691 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 STUB1Q9UNE7 303 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 B3GALT5Q9Y2C3 310 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 SF3B6Q9Y3B4 125 aaKnown RBP23.01■■□□□ 1.27
CPNE1-205ENST00000401607 A0A1W2PRG6 482 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 OR2M5A3KFT3 312 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 AKAP8O43823 692 aaKnown RBP23.01■■□□□ 1.27
CPNE1-205ENST00000401607 NEURL1O76050 574 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 OR2T7P0C7T2 308 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 PSMA1P25786 263 aaKnown RBP23.01■■□□□ 1.27
CPNE1-205ENST00000401607 GPR85P60893 370 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 TMEM176BQ3YBM2 270 aaPredicted RBP23.01■■□□□ 1.27
CPNE1-205ENST00000401607 EEF1A1P5Q5VTE0 462 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 RAET1LQ5VY80 246 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 SPINK14Q6IE38 97 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 TUBA3EQ6PEY2 450 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 VASH2Q86V25 355 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 CLEC1AQ8NC01 280 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 OR2T27Q8NH04 317 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 C5orf34Q96MH7 638 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 ZMIZ1Q9ULJ6 1067 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 HDGFL3Q9Y3E1 203 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 NOX1Q9Y5S8 564 aa23.01■■□□□ 1.27
CPNE1-205ENST00000401607 FREM2Q5SZK8 3169 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 A0A1W2PNV4 684 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 PRSS37A4D1T9 235 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 ZNF17P17021 662 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 USP43Q70EL4 1123 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 ZBTB46Q86UZ6 589 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 ZNF511Q8NB15 262 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 ZNF248Q8NDW4 579 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 SIGLEC12Q96PQ1 595 aa23■■□□□ 1.27
CPNE1-205ENST00000401607 VSX1Q9NZR4 365 aaPredicted RBP23■■□□□ 1.27
CPNE1-205ENST00000401607 B3GAT1Q9P2W7 334 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms