RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 KCNMB4Q86W47 210 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 AMIGO1Q86WK6 493 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 GPBP1Q86WP2 473 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF761Q86XN6 746 aaPredicted RBP3.54□□□□□ -1.84
CLHC1-201ENST00000401408 HPS6Q86YV9 775 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 TMPRSS6Q8IU80 811 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 C12orf76Q8N812 135 aaPredicted RBP3.54□□□□□ -1.84
CLHC1-201ENST00000401408 OR51D1Q8NGF3 324 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 OR9A2Q8NGT5 310 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 OR2AJ1Q8NGZ0 328 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 SLC35B2Q8TB61 432 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 RNASEH2CQ8TDP1 164 aaKnown RBP3.54□□□□□ -1.84
CLHC1-201ENST00000401408 TFGQ92734 400 aaPredicted RBP3.54□□□□□ -1.84
CLHC1-201ENST00000401408 ISOC2Q96AB3 205 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 APH1AQ96BI3 265 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 LGALS12Q96DT0 336 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 COX4I2Q96KJ9 171 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 CXorf58Q96LI9 332 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 ERGIC2Q96RQ1 377 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 TSNAXQ99598 290 aaKnown RBP3.54□□□□□ -1.84
CLHC1-201ENST00000401408 CDCA3Q99618 268 aaPredicted RBP3.54□□□□□ -1.84
CLHC1-201ENST00000401408 MICU1Q9BPX6 476 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 AIF1LQ9BQI0 150 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 BARHL1Q9BZE3 327 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 CCDC90BQ9GZT6 254 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 OR51M1Q9H341 326 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 CDCP1Q9H5V8 836 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 GAREM1Q9H706 876 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 TIGARQ9NQ88 270 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 FGFR1OP2Q9NVK5 253 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 GNG12Q9UBI6 72 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 CDC42EP3Q9UKI2 254 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 GOLT1BQ9Y3E0 138 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 ACTL7BQ9Y614 415 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 IRAK3Q9Y616 596 aa3.54□□□□□ -1.84
CLHC1-201ENST00000401408 CLUHO75153 1309 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 C2CD4DB7Z1M9 353 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 SGCEO43556 437 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 MGRN1O60291 552 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 FADS1O60427 444 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 LDB3O75112 727 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 TDP2O95551 362 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 CYB5R3P00387 301 aaPredicted RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 HPXP02790 462 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 ATP1A1P05023 1023 aaKnown RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 DBHP09172 617 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 RBP1P09455 135 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 FBP1P09467 338 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 FAM228BP0C875 321 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 HOXB9P17482 250 aaPredicted RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 RCVRNP35243 200 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 GNPDA1P46926 289 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 IDH3GP51553 393 aaPredicted RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 VSX2P58304 361 aaPredicted RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 RAB10P61026 200 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 RANP62826 216 aaKnown RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 CXADRP78310 365 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 ELF3P78545 371 aaPredicted RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 IL13RA1P78552 427 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 KLRC3Q07444 240 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 LY6KQ17RY6 165 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF528Q3MIS6 628 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 LY6G6FQ5SQ64 297 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 ARTNQ5T4W7 220 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 KCTD16Q68DU8 428 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 NUFIP2Q7Z417 695 aaKnown RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 HDDC2Q7Z4H3 204 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 TMEM144Q7Z5S9 345 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 CCDC190Q86UF4 302 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 LRRC18Q8N456 261 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 HSD17B11Q8NBQ5 300 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 FAM110BQ8TC76 370 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 CREB3L1Q96BA8 519 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 ZBTB8AQ96BR9 441 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 FAF2Q96CS3 445 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 R3HDM4Q96D70 268 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 ZC3HAV1LQ96H79 300 aaKnown RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 OR2V2Q96R30 315 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 MBOAT4Q96T53 435 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 PTDSS2Q9BVG9 487 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 SLC2A11Q9BYW1 496 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 SYT4Q9H2B2 425 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 WDR41Q9HAD4 459 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 TMEM138Q9NPI0 162 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 CUTCQ9NTM9 273 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 MAT2BQ9NZL9 334 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 GSKIPQ9P0R6 139 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 FARSAQ9Y285 508 aaKnown RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 MRPS28Q9Y2Q9 187 aaKnown RBP3.53□□□□□ -1.84
CLHC1-201ENST00000401408 TMED7Q9Y3B3 224 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 STYXL1Q9Y6J8 313 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 GREB1Q4ZG55 1949 aa3.53□□□□□ -1.84
CLHC1-201ENST00000401408 A0A1W2PPK0 400 aa3.52□□□□□ -1.85
CLHC1-201ENST00000401408 A0A1W2PRD5 423 aa3.52□□□□□ -1.85
CLHC1-201ENST00000401408 PQLC2LA1A4F0 135 aa3.52□□□□□ -1.85
CLHC1-201ENST00000401408 PSMB11A5LHX3 300 aa3.52□□□□□ -1.85
CLHC1-201ENST00000401408 TMEM8BA6NDV4 472 aa3.52□□□□□ -1.85
CLHC1-201ENST00000401408 CXCR6O00574 342 aa3.52□□□□□ -1.85
CLHC1-201ENST00000401408 PPP1R2P9O14990 202 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms