RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ETV5P41161 510 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ETV1P50549 477 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 RAE1P78406 368 aaKnown RBP13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 EXT1Q16394 746 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 CFAP77Q6ZQR2 320 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 GLB1L2Q8IW92 636 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 OR56B4Q8NH76 319 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ELMOD3Q96FG2 381 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 SLC38A1Q9H2H9 487 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 FAM230AA0A1W2PPH8 454 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 MEIS3P1A6NDR6 274 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ADH6P28332 368 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 EPHA2P29317 976 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 NR4A2P43354 598 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 GALEQ14376 348 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 VWA2Q5GFL6 755 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 TSSK4Q6SA08 328 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ARSKQ6UWY0 536 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 H1FNTQ75WM6 255 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ZNF611Q8N823 705 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 CCDC71LQ8N9Z2 235 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 RCBTB1Q8NDN9 531 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 TM9SF4Q92544 642 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 TOMM40LQ969M1 308 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ENY2Q9NPA8 101 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 DRD3P35462 400 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 CLDN12P56749 244 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 Q6ZNX1 250 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 BEND4Q6ZU67 534 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 FAM57BQ71RH2 274 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 VASH1Q7L8A9 365 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 RPS19BP1Q86WX3 136 aaKnown RBP13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ZNF547Q8IVP9 402 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 STEAP2Q8NFT2 490 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 OR13C9Q8NGT0 318 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 PSD2Q9BQI7 771 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 UTP23Q9BRU9 249 aaKnown RBP13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 PLA2G2FQ9BZM2 168 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 DNTTIP1Q9H147 329 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 WSB2Q9NYS7 404 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 ZNF226Q9NYT6 803 aa13.08□□□□□ -0.32
PCDHGA11-201ENST00000398587 IGHV3-20A0A0C4DH32 117 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 GLB1P16278 677 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 FASLGP48023 281 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 CASP6P55212 293 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 GFERP55789 205 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 FCRL6Q6DN72 434 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 RTL6Q6ICC9 239 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 KMT5CQ86Y97 462 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 ATOH1Q92858 354 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 ST6GALNAC5Q9BVH7 336 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 SLC19A3Q9BZV2 496 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 PAPLNO95428 1278 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 KNG1P01042 644 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 HTR2BP41595 481 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 EPHA4P54764 986 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 AGAP7PQ5VUJ5 663 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 SLC16A14Q7RTX9 510 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 CSF3RQ99062 836 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 SLA2Q9H6Q3 261 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 ARPC5O15511 151 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 P2RX6O15547 441 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 CD1EP15812 388 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 CDK2P24941 298 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 APOBEC1P41238 236 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 RPL27P61353 136 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 APOOLQ6UXV4 268 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 LACC1Q8IV20 430 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 CCDC28AQ8IWP9 274 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 SGPP2Q8IWX5 399 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 PDZD9Q8IXQ8 264 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 PM20D2Q8IYS1 436 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 LRRC46Q96FV0 321 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 COX14Q96I36 57 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 NXF5Q9H1B4 397 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 POU2F3Q9UKI9 436 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 NUP50Q9UKX7 468 aa13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 YBX2Q9Y2T7 364 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-201ENST00000398587 DOCK3Q8IZD9 2030 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 ANKRD30BLA7E2S9 258 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 NUDT21O43809 227 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 RFPL3O75679 317 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 FKBP2P26885 142 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 HTR2CP28335 458 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 BDKRB2P30411 391 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 ATP1B3P54709 279 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 IHHQ14623 411 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 Q6ZS52 159 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 ZNF709Q8N972 641 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 FAM83FQ8NEG4 500 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 LAT2Q9GZY6 243 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 ISYNA1Q9NPH2 558 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 MUTYHQ9UIF7 546 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 CAMK2AQ9UQM7 478 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 DSCR3O14972 297 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 GDNFP39905 211 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms