RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ZCCHC18P0CG32 403 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 HNRNPCL4P0DMR1 293 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 ZNF43P17038 809 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 ARR3P36575 388 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 CRISP3P54108 245 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 LRRC74AQ0VAA2 488 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 SF3A3Q12874 501 aaKnown RBP eCLIP10.38□□□□□ -0.75
TFF3-202ENST00000398431 CEACAM16Q2WEN9 425 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 MS4A18Q3C1V0 323 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 MDP1Q86V88 176 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 CARM1Q86X55 608 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 WDFY1Q8IWB7 410 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 TAAR8Q969N4 342 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 VPS33AQ96AX1 596 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 TMEM19Q96HH6 336 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 ANKRD27Q96NW4 1050 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 SNX18Q96RF0 628 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 TPT1P8Q9HAU6 139 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 NOX3Q9HBY0 568 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 MOV10Q9HCE1 1003 aaKnown RBP10.38□□□□□ -0.75
TFF3-202ENST00000398431 CALML5Q9NZT1 146 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 P2RX2Q9UBL9 471 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 FBXO9Q9UK97 447 aaPredicted RBP10.38□□□□□ -0.75
TFF3-202ENST00000398431 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
TFF3-202ENST00000398431 DYSFO75923 2080 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 IGKV1D-42A0A075B6H8 117 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 VSTM5A8MXK1 200 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 SLCO1B7G3V0H7 640 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 TRAF3IP2O43734 574 aaPredicted RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 SLC43A1O75387 559 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 VENTXO95231 258 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 IFNGR1P15260 489 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 NCF2P19878 526 aaPredicted RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 NR4A1P22736 598 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 COL8A2P25067 703 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 EPHA3P29320 983 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 CRATP43155 626 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 DSTNP60981 165 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 POU3F1Q03052 451 aaPredicted RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 DAG1Q14118 895 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 LARS2Q15031 903 aaKnown RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 ELFN2Q5R3F8 820 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 COMTD1Q86VU5 262 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 MEX3DQ86XN8 651 aaKnown RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 TMEM123Q8N131 208 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 ARHGAP24Q8N264 748 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 GLB1L3Q8NCI6 653 aaPredicted RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 IL17RDQ8NFM7 739 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 STON2Q8WXE9 905 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 MAELQ96JY0 434 aaKnown RBP10.37□□□□□ -0.75
TFF3-202ENST00000398431 OR2M2Q96R28 347 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 RACGAP1Q9H0H5 632 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 LRMDAQ9H2I8 198 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 CRLF2Q9HC73 371 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 BCL2L10Q9HD36 194 aa10.37□□□□□ -0.75
TFF3-202ENST00000398431 M0R082 166 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 WNT9BO14905 357 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 SLC22A3O75751 556 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 SEC14L2O76054 403 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 HPRP00739 348 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 IL6P05231 212 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 KITP10721 976 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 ZNF35P13682 527 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 HLA-DOBP13765 273 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 GRPRP30550 384 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 SRP14P37108 136 aaKnown RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 ARFIP2P53365 341 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 NPRL3Q12980 569 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 SNTB2Q13425 540 aaKnown RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 PDCD4Q53EL6 469 aaKnown RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 ZNF311Q5JNZ3 666 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 KRT80Q6KB66 452 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 H1FNTQ75WM6 255 aaPredicted RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 ASRGL1Q7L266 308 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 CCDC36Q8IYA8 594 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 GPR137CQ8N3F9 429 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 ZNF417Q8TAU3 575 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 SLC35B4Q969S0 331 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 MRPL24Q96A35 216 aaKnown RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 SLC41A3Q96GZ6 507 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 MS4A3Q96HJ5 214 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 RSRC1Q96IZ7 334 aaKnown RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 TXNDC15Q96J42 360 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 ZNF587Q96SQ5 575 aaPredicted RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 ZBTB18Q99592 522 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 MRPL37Q9BZE1 423 aaKnown RBP10.36□□□□□ -0.75
TFF3-202ENST00000398431 MYLK2Q9H1R3 596 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 TPK1Q9H3S4 243 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 ZNF224Q9NZL3 707 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 PCDHB14Q9Y5E9 798 aa10.36□□□□□ -0.75
TFF3-202ENST00000398431 ZNF99A8MXY4 864 aaPredicted RBP10.35□□□□□ -0.75
TFF3-202ENST00000398431 FAM157AC9JC47 383 aa10.35□□□□□ -0.75
TFF3-202ENST00000398431 M0R3G1 203 aa10.35□□□□□ -0.75
TFF3-202ENST00000398431 OR2T1O43869 369 aa10.35□□□□□ -0.75
TFF3-202ENST00000398431 CCDC22O60826 627 aa10.35□□□□□ -0.75
TFF3-202ENST00000398431 HLA-HP01893 362 aa10.35□□□□□ -0.75
TFF3-202ENST00000398431 HPXP02790 462 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms