RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 SPATA31D4Q6ZUB0 917 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 OR6K2Q8NGY2 324 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 OR6X1Q8NH79 312 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 RNF133Q8WVZ7 376 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 WDR76Q9H967 626 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 NANOGQ9H9S0 305 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 CDC42EP3Q9UKI2 254 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 AGO1Q9UL18 857 aaKnown RBP11.91□□□□□ -0.5
CCBE1-201ENST00000398179 MOKQ9UQ07 419 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 CLTCL1P53675 1640 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 TMEM150BA6NC51 233 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 HPP00738 406 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 GAAP10253 952 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 AADACP22760 399 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 XCR1P46094 333 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 AGTR2P50052 363 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 MAXP61244 160 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 MRPS34P82930 218 aaKnown RBP11.91□□□□□ -0.5
CCBE1-201ENST00000398179 CBX2Q14781 532 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-201ENST00000398179 SFRP4Q6FHJ7 346 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-201ENST00000398179 C17orf64Q86WR6 236 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 TWIST2Q8WVJ9 160 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 KIR3DX1Q9H7L2 352 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 NOX3Q9HBY0 568 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 C1orf123Q9NWV4 160 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 FUT2Q10981 343 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 ZNF628Q5EBL2 1059 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 MRPL54Q6P161 138 aaKnown RBP11.91□□□□□ -0.5
CCBE1-201ENST00000398179 TFAP2EQ6VUC0 442 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 LBX2Q6XYB7 198 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 TAS1R1Q7RTX1 841 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 ZNF695Q8IW36 515 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 CELF5Q8N6W0 485 aaKnown RBP11.91□□□□□ -0.5
CCBE1-201ENST00000398179 PLSCR3Q9NRY6 295 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 SERTAD4Q9NUC0 356 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 NAT8Q9UHE5 227 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 SLC27A5Q9Y2P5 690 aa11.91□□□□□ -0.5
CCBE1-201ENST00000398179 MRPS2Q9Y399 296 aaKnown RBP11.91□□□□□ -0.5
CCBE1-201ENST00000398179 GJB5O95377 273 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 RFX5P48382 616 aaPredicted RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 KCNQ1P51787 676 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 DUSP8Q13202 625 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 ELOBQ15370 118 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TCTN1Q2MV58 587 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 UNC50Q53HI1 259 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TMEM191AQ9H0A3 160 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 OSGIN2Q9Y236 505 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 RNF225M0QZC1 329 aaPredicted RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 NCR1O76036 304 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 PRR35P0CG20 571 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 CD79AP11912 226 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 MC4RP32245 332 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 EBPQ15125 230 aaKnown RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 ZNF66Q6ZN08 573 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 APOBEC3FQ8IUX4 373 aaKnown RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 OR14C36Q8NHC7 312 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 BOCQ9BWV1 1114 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 C20orf27Q9GZN8 174 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 GLI2P10070 1586 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 CEP152O94986 1710 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 CAMSAP1Q5T5Y3 1602 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3DA0A087WVF3 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3IA0A087WXS9 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3EA0A087X179 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3KA0A087X1G2 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3BA6NDS4 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3FA6NER0 549 aaPredicted RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 OR52A4PA6NMU1 304 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3LB9A6J9 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 SLC1A7O00341 560 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 SERPINE2P07093 398 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3HP0C7X1 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 DCAF7P61962 342 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 SLC14A1Q13336 389 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 ADIPOQQ15848 244 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 CATSPEREQ5SY80 951 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3GQ6DHY5 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3CQ6IPX1 549 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TMEM144Q7Z5S9 345 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 TBC1D3Q8IZP1 549 aaPredicted RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 OR4L1Q8NH43 312 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 OR5R1Q8NH85 324 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 FYTTD1Q96QD9 318 aaKnown RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 COL25A1Q9BXS0 654 aaPredicted RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 ISYNA1Q9NPH2 558 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
CCBE1-201ENST00000398179 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
CCBE1-201ENST00000398179 MYOCOSA0A1B0GUC4 107 aa11.9□□□□□ -0.51
CCBE1-201ENST00000398179 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.51
CCBE1-201ENST00000398179 FTH1P19P0C7X4 201 aa11.9□□□□□ -0.51
CCBE1-201ENST00000398179 MAPTP10636 758 aaKnown RBP11.9□□□□□ -0.51
CCBE1-201ENST00000398179 HLA-DOBP13765 273 aa11.9□□□□□ -0.51
CCBE1-201ENST00000398179 CREB1P16220 341 aa11.9□□□□□ -0.51
CCBE1-201ENST00000398179 NME2P22392 152 aa11.9□□□□□ -0.51
CCBE1-201ENST00000398179 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.51
CCBE1-201ENST00000398179 NEIL3Q8TAT5 605 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms