RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CXCR1P25024 350 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 RAB30Q15771 203 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF440Q8IYI8 595 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 NLGN4YQ8NFZ3 816 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 DVL3Q92997 716 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 FAM46BQ96A09 425 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SRA1Q9HD15 236 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 RXFP3Q9NSD7 469 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SLC22A7Q9Y694 548 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TMEM14AQ9Y6G1 99 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 PRAMEF27A3QJZ7 478 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 CDHR4A6H8M9 788 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 RGS11O94810 467 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ACHEP22303 614 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ETV5P41161 510 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF136P52737 540 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ARSIQ5FYB1 569 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 TANGO2Q6ICL3 276 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 FAAP20Q6NZ36 180 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 GPAT4Q86UL3 456 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 CD163Q86VB7 1156 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MFSD9Q8NBP5 474 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 IL17FQ96PD4 163 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 OR52D1Q9H346 318 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MYOZ1Q9NP98 299 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 LHX9Q9NQ69 397 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 WBP1LQ9NX94 342 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 LRFN1Q9P244 771 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MEIKINA0A087WXM9 373 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ERVH48-1M5A8F1 160 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 CCSO14618 274 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 KNG1P01042 644 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 EIF4EP06730 217 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 F3P13726 295 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 RPS4Y1P22090 263 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 PTGER1P34995 402 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 HCCSP53701 268 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 TMEM91Q6ZNR0 172 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MEPCEQ7L2J0 689 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 UBE3DQ7Z6J8 389 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 TET1Q8NFU7 2136 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 OR8D4Q8NGM9 314 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ARRDC3Q96B67 414 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MRPS17Q9Y2R5 130 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 AUP1Q9Y679 476 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 A0A1B0GUH1 482 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 FGF18O76093 207 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 GJA1P17302 382 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 AMY2BP19961 511 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 RPS15AP62244 130 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 FABP5Q01469 135 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 GNMTQ14749 295 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 RNF151Q2KHN1 245 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ADAM5Q6NVV9 412 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MED25Q71SY5 747 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 SLC29A4Q7RTT9 530 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 DNAAF1Q8NEP3 725 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 NT5CQ8TCD5 201 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 SUCNR1Q9BXA5 334 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 C1QTNF6Q9BXI9 259 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 TRPM7Q96QT4 1865 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 PCM1Q15154 2024 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 A0A0B4J293 547 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 SURF4O15260 269 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 TNFSF14O43557 240 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 NKX2-2O95096 273 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 GIPP09681 153 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 SULT1A3P0DMM9 295 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 SULT1A4P0DMN0 295 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 NQO2P16083 231 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 CLEC9AQ6UXN8 241 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 NAXDQ8IW45 347 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MRPL41Q8IXM3 137 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 EIF4E3Q8N5X7 224 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 LIPHQ8WWY8 451 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 SLC17A5Q9NRA2 495 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MRPS33Q9Y291 106 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 CBY1Q9Y3M2 126 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 FEZF1A0PJY2 475 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 OR5K4A6NMS3 321 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 HRO43593 1189 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 IFNGR1P15260 489 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 CD96P40200 585 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 OPRD1P41143 372 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 EBPQ15125 230 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 RBMS2Q15434 407 aaKnown RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 GXYLT1Q4G148 440 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 ARHGAP40Q5TG30 622 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 P4HA3Q7Z4N8 544 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 LRRC25Q8N386 305 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 FBXL6Q8N531 539 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 FRMD1Q8N878 549 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 CAMKVQ8NCB2 501 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 SDR9C7Q8NEX9 313 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 MED20Q9H944 212 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 TIMM8BQ9Y5J9 83 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-205ENST00000397611 A0A1W2PPV9 198 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 OGG1O15527 345 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 HSPA12AO43301 675 aa5.02□□□□□ -1.61
PTPRD-205ENST00000397611 B4GALT2O60909 372 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms