RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ACVR1BP36896 505 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 H3F3AP84243 136 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 ZP4Q12836 540 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 KRR1Q13601 381 aaKnown RBP18.93■□□□□ 0.62
CPNE1-204ENST00000397443 RPUSD3Q6P087 351 aaKnown RBP18.93■□□□□ 0.62
CPNE1-204ENST00000397443 FAM180AQ6UWF9 173 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 SLC35D2Q76EJ3 337 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 CXXC5Q7LFL8 322 aaKnown RBP18.93■□□□□ 0.62
CPNE1-204ENST00000397443 UEVLDQ8IX04 471 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 CISD2Q8N5K1 135 aaKnown RBP18.93■□□□□ 0.62
CPNE1-204ENST00000397443 Q8NA96 180 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 OR9Q1Q8NGQ5 310 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 ZNF775Q96BV0 537 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-204ENST00000397443 EMC6Q9BV81 110 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 TXNIPQ9H3M7 391 aa18.93■□□□□ 0.62
CPNE1-204ENST00000397443 PTGES3LE9PB15 166 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 SLC1A7O00341 560 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 ARHGEF9O43307 516 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 FAM20BO75063 409 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 CRYABP02511 175 aaKnown RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 GYPBP06028 91 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 LYNP07948 512 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 CLUP10909 449 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 ACVR2AP27037 513 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 CDKN2AP42771 156 aaKnown RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 RPL27P61353 136 aaKnown RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 ITGADQ13349 1161 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 MESTQ5EB52 335 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 LEG1Q6P5S2 330 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 PXKQ7Z7A4 578 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 TEX19Q8NA77 164 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 SLC37A3Q8NCC5 494 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 ADPRHL1Q8NDY3 354 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 SGCDQ92629 289 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 HDAC2Q92769 488 aaKnown RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 WDYHV1Q96HA8 205 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 ZNF582Q96NG8 517 aaPredicted RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 TUBD1Q9UJT1 453 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 NBEAQ8NFP9 2946 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 A0A1W2PNV4 684 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 PRR23D1E9PI22 279 aaPredicted RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 FZD7O75084 574 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 TNFAIP8O95379 198 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 BCL10O95999 233 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 PRR23D2P0DMB1 279 aaPredicted RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 ZNF43P17038 809 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 EEF1B2P24534 225 aaKnown RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 RPS3AP61247 264 aaKnown RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 ZNF239Q16600 458 aaKnown RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 EEF1A1P5Q5VTE0 462 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 CHMP1BQ7LBR1 199 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 WDFY1Q8IWB7 410 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 FAM26EQ8N5C1 309 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 OR5M9Q8NGP3 310 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 CPNE4Q96A23 557 aaPredicted RBP18.92■□□□□ 0.62
CPNE1-204ENST00000397443 OXGR1Q96P68 337 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 OR51V1Q9H2C8 321 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 KLHL21Q9UJP4 597 aa18.92■□□□□ 0.62
CPNE1-204ENST00000397443 XKRYO14609 159 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 IDH3BO43837 385 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 AGFG1P52594 562 aaKnown RBP18.91■□□□□ 0.62
CPNE1-204ENST00000397443 SLC16A1P53985 500 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 CDH15P55291 814 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 PIGFQ07326 219 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 PON3Q15166 354 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 INAQ16352 499 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 KLHL12Q53G59 568 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 B3GLCTQ6Y288 498 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 ARIH2OSQ8N7S6 290 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 RERGLQ9H628 205 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 NOX1Q9Y5S8 564 aa18.91■□□□□ 0.62
CPNE1-204ENST00000397443 APEHP13798 732 aaKnown RBP18.9■□□□□ 0.62
CPNE1-204ENST00000397443 BIDP55957 195 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 RUNX1T1Q06455 604 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 BCL2A1Q16548 175 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 GPR139Q6DWJ6 353 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 SYT14Q8NB59 555 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 NPEPL1Q8NDH3 523 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 OR51L1Q8NGJ5 315 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 ABHD3Q8WU67 409 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 PTP4A1Q93096 173 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 TSSK2Q96PF2 358 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 RPRD1BQ9NQG5 326 aaKnown RBP18.9■□□□□ 0.62
CPNE1-204ENST00000397443 H2AFY2Q9P0M6 372 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-204ENST00000397443 RASD1Q9Y272 281 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 RP1L1Q8IWN7 2480 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-204ENST00000397443 OR6C68A6NDL8 312 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 DNPH1O43598 174 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 SYNGR4O95473 234 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 PAICSP22234 425 aaKnown RBP18.9■□□□□ 0.62
CPNE1-204ENST00000397443 CRHBPP24387 322 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 DAP3P51398 398 aaKnown RBP18.9■□□□□ 0.62
CPNE1-204ENST00000397443 RPS7P62081 194 aaKnown RBP18.9■□□□□ 0.62
CPNE1-204ENST00000397443 FCRLAQ7L513 359 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 ZNF540Q8NDQ6 660 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 FNDC9Q8TBE3 224 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 Q96MT0 163 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 TUBA1CQ9BQE3 449 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 PRRG4Q9BZD6 226 aa18.9■□□□□ 0.62
CPNE1-204ENST00000397443 AQP7O14520 342 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms