RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 EMC6Q9BV81 110 aa18.67■□□□□ 0.58
TSPAN4-206ENST00000397408 MAGIXQ9H6Y5 334 aa18.67■□□□□ 0.58
TSPAN4-206ENST00000397408 MCCC2Q9HCC0 563 aa18.67■□□□□ 0.58
TSPAN4-206ENST00000397408 PRR14LQ5THK1 2151 aa18.67■□□□□ 0.58
TSPAN4-206ENST00000397408 CIB4A0PJX0 185 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 UPK3AO75631 287 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 GADD45GO95257 159 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 THBDP07204 575 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 IFNGR1P15260 489 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 RRM2P31350 389 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 AQP2P41181 271 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 MAGEA2P43356 314 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 GPR4P46093 362 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 SMIM11AP58511 58 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 CHRNB3Q05901 458 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 FLOT2Q14254 428 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 STK11Q15831 433 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 FAM98BQ52LJ0 330 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 CARD17Q5XLA6 110 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 PIWIL3Q7Z3Z3 882 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 ABHD12BQ7Z5M8 362 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 POP5Q969H6 163 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 APCP25054 2843 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 SLC35F4A4IF30 521 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 EFCAB9A8MZ26 197 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 ZNF587BE7ETH6 402 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 MPGP29372 298 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 SEC23BQ15437 767 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 ALKBH2Q6NS38 261 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 SLC35D2Q76EJ3 337 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 CDK20Q8IZL9 346 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 TMEM123Q8N131 208 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 OR4K5Q8NGD3 323 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 OR13C2Q8NGS9 318 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 MOSPD2Q8NHP6 518 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 FUZQ9BT04 418 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 LINC00470Q9BZP3 86 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 LRMDAQ9H2I8 198 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 SLC7A8Q9UHI5 535 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 POMPQ9Y244 141 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 TMEM5Q9Y2B1 443 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 HIF3AQ9Y2N7 669 aa18.66■□□□□ 0.58
TSPAN4-206ENST00000397408 AQP12BA6NM10 295 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 CTAG2O75638 210 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 F13BP05160 661 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 TSPAN19P0C672 248 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 CRYGSP22914 178 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 BIDP55957 195 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 MELKQ14680 651 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 TAB1Q15750 504 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 FBXW10Q5XX13 1052 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 LINGO2Q7L985 606 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 WFDC8Q8IUA0 241 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 WDFY1Q8IWB7 410 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 AQP12AQ8IXF9 295 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 ADGRG5Q8IZF4 528 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 GPR137CQ8N3F9 429 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 FAM46AQ96IP4 442 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 USB1Q9BQ65 265 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 INIPQ9NRY2 104 aa18.65■□□□□ 0.58
TSPAN4-206ENST00000397408 TRAV27A0A087WT01 109 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 SH3PXD2BA1X283 911 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 ZNF726A6NNF4 738 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 CDC42EP2O14613 210 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 CLOCKO15516 846 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 CDH2P19022 906 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 RPS4XP62701 263 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 ROR2Q01974 943 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 CAMK2DQ13557 499 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 CCDC121Q6ZUS5 278 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 TMPRSS11FQ6ZWK6 438 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 OAFQ86UD1 273 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 SPATA24Q86W54 205 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 OR51A7Q8NH64 312 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 KRCC1Q9NPI7 259 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 RASSF1Q9NS23 344 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 AURKCQ9UQB9 309 aa18.64■□□□□ 0.57
TSPAN4-206ENST00000397408 A0A1W2PRG6 482 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 DHRS12A0PJE2 317 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 FAM221AA4D161 298 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 GOSR1O95249 250 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 RAP2AP10114 183 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 OMPP47874 163 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 SLC9A3P48764 834 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 KRTAP10-9P60411 292 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 TGFBR3Q03167 851 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 LAPTM4AQ15012 233 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 ALG10Q5BKT4 473 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 HMBOX1Q6NT76 420 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 C1orf162Q8NEQ5 155 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 OR6X1Q8NH79 312 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 HSD17B8Q92506 261 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 ADAD1Q96M93 576 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 ALPK1Q96QP1 1244 aa18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 CLEC4MQ9H2X3 399 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-206ENST00000397408 OR5H1A6NKK0 313 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 DEFB108AA8MXU0 73 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 MCIDASD6RGH6 385 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 M0R3G1 203 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 SIAH2O43255 324 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms