RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 RAP1AP62834 184 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 SLC35A2P78381 396 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 KRR1Q13601 381 aaKnown RBP11.33□□□□□ -0.6
LMCD1-202ENST00000397386 SMN1Q16637 294 aaKnown RBP11.33□□□□□ -0.6
LMCD1-202ENST00000397386 ARMC4Q5T2S8 1044 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 SLC35D2Q76EJ3 337 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 JAZF1Q86VZ6 243 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 CPOQ8IVL8 374 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 UEVLDQ8IX04 471 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 UBQLNLQ8IYU4 475 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 SLC37A3Q8NCC5 494 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 NPEPL1Q8NDH3 523 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 OR52E2Q8NGJ4 325 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 OR4K13Q8NH42 304 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 PTP4A1Q93096 173 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 ZNF582Q96NG8 517 aaPredicted RBP11.33□□□□□ -0.6
LMCD1-202ENST00000397386 TIMP4Q99727 224 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 SRXN1Q9BYN0 137 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 NMNAT2Q9BZQ4 307 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 EXO5Q9H790 373 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 HINT3Q9NQE9 182 aaKnown RBP11.33□□□□□ -0.6
LMCD1-202ENST00000397386 FKBP14Q9NWM8 211 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 CNOT2Q9NZN8 540 aaKnown RBP11.33□□□□□ -0.6
LMCD1-202ENST00000397386 H2AFY2Q9P0M6 372 aaPredicted RBP11.33□□□□□ -0.6
LMCD1-202ENST00000397386 ZNF346Q9UL40 294 aaKnown RBP11.33□□□□□ -0.6
LMCD1-202ENST00000397386 LIPGQ9Y5X9 500 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 ZNF407Q9C0G0 2248 aa11.33□□□□□ -0.6
LMCD1-202ENST00000397386 MGAQ8IWI9 3026 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 DNAJC13O75165 2243 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 OR14I1A6ND48 311 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 EFCAB10A6NFE3 127 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 ZNF814B7Z6K7 855 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 NPIPA5E9PKD4 350 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 H0YC42 278 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
LMCD1-202ENST00000397386 XPNPEP2O43895 674 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 CXCL13O43927 109 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 FAM20BO75063 409 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 ZNF43P17038 809 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 SLC15A1P46059 708 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 SLC25A1P53007 311 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 MLLT10P55197 1068 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 POU3F1Q03052 451 aaPredicted RBP11.32□□□□□ -0.6
LMCD1-202ENST00000397386 CRMP1Q14194 572 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 MESTQ5EB52 335 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 PLBD1Q6P4A8 553 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 ZNF540Q8NDQ6 660 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 RELTQ969Z4 430 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 SARAFQ96BY9 339 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 RASD2Q96D21 266 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 ADAD1Q96M93 576 aaKnown RBP11.32□□□□□ -0.6
LMCD1-202ENST00000397386 NMNAT3Q96T66 252 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 PRDM14Q9GZV8 571 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 MRPS18AQ9NVS2 196 aaKnown RBP11.32□□□□□ -0.6
LMCD1-202ENST00000397386 DNAJC27Q9NZQ0 273 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 PSORS1C1Q9UIG5 152 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 NPIPA1Q9UND3 350 aa11.32□□□□□ -0.6
LMCD1-202ENST00000397386 IRGMA1A4Y4 181 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SLC22A31A6NKX4 558 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 CENPBD1B2RD01 187 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 TRAF3IP2O43734 574 aaPredicted RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 PLGP00747 810 aaPredicted RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 FAM87AP0C7U9 286 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SFTPCP11686 197 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 HLA-DOBP13765 273 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 IFNGR1P15260 489 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SLC2A5P22732 501 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 HTR1FP30939 366 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 ACVR1BP36896 505 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 CDKN2AP42771 156 aaKnown RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SLC16A1P53985 500 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 CDH11P55287 796 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 TUBA4AP68366 448 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 C1DQ13901 141 aaKnown RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SLC17A1Q14916 467 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 KRTCAP3Q53RY4 240 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 NIPAL3Q6P499 406 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 PM20D2Q8IYS1 436 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 KDM8Q8N371 416 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SDR9C7Q8NEX9 313 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 TSPAN14Q8NG11 270 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 OR6X1Q8NH79 312 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 ASB10Q8WXI3 467 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 WDYHV1Q96HA8 205 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 HAO2Q9NYQ3 351 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 VSX1Q9NZR4 365 aaPredicted RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SPRR3Q9UBC9 169 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 WARS2Q9UGM6 360 aaKnown RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
LMCD1-202ENST00000397386 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
LMCD1-202ENST00000397386 A0A087WXM4 84 aa11.3□□□□□ -0.6
LMCD1-202ENST00000397386 PRSS37A4D1T9 235 aa11.3□□□□□ -0.6
LMCD1-202ENST00000397386 OR6C68A6NDL8 312 aa11.3□□□□□ -0.6
LMCD1-202ENST00000397386 FAM183AA6NL82 134 aa11.3□□□□□ -0.6
LMCD1-202ENST00000397386 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
LMCD1-202ENST00000397386 CYTIPO60759 359 aa11.3□□□□□ -0.6
LMCD1-202ENST00000397386 RAMP1O60894 148 aa11.3□□□□□ -0.6
LMCD1-202ENST00000397386 SERPINI2O75830 405 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms