RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ARMCX4Q5H9R4 360 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 C1orf140Q5VVS0 124 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 WBP2NLQ6ICG8 309 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 C11orf87Q6NUJ2 197 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 LRRC74BQ6ZQY2 392 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ZCCHC23Q6ZST2 131 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 BCL6BQ8N143 479 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 GPR137CQ8N3F9 429 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 MFSD8Q8NHS3 518 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF837Q96EG3 531 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 SYT3Q9BQG1 590 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 MTHFD2LQ9H903 347 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 GRPEL1Q9HAV7 217 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ASIC5Q9NY37 505 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF69Q9UC07 566 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 MARCOQ9UEW3 520 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 OPN4Q9UHM6 478 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF346Q9UL40 294 aaKnown RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 NOX1Q9Y5S8 564 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 DSPPQ9NZW4 1301 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 CDHR4A6H8M9 788 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 FTCDNL1E5RQL4 147 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 IGHV2-5P01817 119 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 DBIP07108 87 aaKnown RBP8.02□□□□□ -1.13
NEDD9-203ENST00000397378 PNMTP11086 282 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 ACAA2P42765 397 aaKnown RBP8.02□□□□□ -1.13
NEDD9-203ENST00000397378 CAPZA2P47755 286 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 EMX2Q04743 252 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 MAD2L1BPQ15013 274 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-203ENST00000397378 SYPL1Q16563 259 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 WHAMMP3Q1A5X7 153 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 SMU1Q2TAY7 513 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 ANXA8L1Q5VT79 327 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 OLFML2AQ68BL7 652 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF627Q7L945 461 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 LRP11Q86VZ4 500 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 ANKRD46Q86W74 232 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 TREML1Q86YW5 311 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 KDM8Q8N371 416 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 ANKFN1Q8N957 763 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 PIK3C3Q8NEB9 887 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 VPS37AQ8NEZ2 397 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 OR4F5Q8NH21 305 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 AGR3Q8TD06 166 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 TUBGCP3Q96CW5 907 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 MS4A3Q96HJ5 214 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF48Q96MX3 618 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-203ENST00000397378 OXGR1Q96P68 337 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 RSPO3Q9BXY4 272 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-203ENST00000397378 TXLNGYQ9BZA5 131 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 DPY30Q9C005 99 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 DENND2DQ9H6A0 471 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-203ENST00000397378 NKIRAS2Q9NYR9 191 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 MYEF2Q9P2K5 600 aaKnown RBP8.02□□□□□ -1.13
NEDD9-203ENST00000397378 B3GAT1Q9P2W7 334 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 NUP50Q9UKX7 468 aa8.02□□□□□ -1.13
NEDD9-203ENST00000397378 LOC102725191A0A1B0GVB3 256 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 CLDN34H7C241 214 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 AKAP8O43823 692 aaKnown RBP8.01□□□□□ -1.13
NEDD9-203ENST00000397378 AHSA1O95433 338 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 CPSF4O95639 269 aaKnown RBP8.01□□□□□ -1.13
NEDD9-203ENST00000397378 HLA-HP01893 362 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 CRYBA1P05813 215 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 GKN3PP0CG01 181 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 NAT2P11245 290 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 KRT4P19013 534 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 ALDH3A1P30838 453 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 CHI3L1P36222 383 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-203ENST00000397378 CRYBB2P43320 205 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 ANXA11P50995 505 aaKnown RBP8.01□□□□□ -1.13
NEDD9-203ENST00000397378 RAG2P55895 527 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 COPZ1P61923 177 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 GALK2Q01415 458 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 TEKQ02763 1124 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 CASP8Q14790 479 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF362Q5T0B9 420 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-203ENST00000397378 AVPI1Q5T686 147 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 C16orf87Q6PH81 154 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 PEX5LQ8IYB4 626 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 GSPT2Q8IYD1 628 aaKnown RBP8.01□□□□□ -1.13
NEDD9-203ENST00000397378 TMEM123Q8N131 208 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 CADM2Q8N3J6 435 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 KIF18AQ8NI77 898 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 TESCQ96BS2 214 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 LRR1Q96L50 414 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 ZIM3Q96PE6 472 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 OR2M2Q96R28 347 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 SLC35A5Q9BS91 424 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 PTDSS2Q9BVG9 487 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 RLIMQ9NVW2 624 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 PLEK2Q9NYT0 353 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 SLC7A8Q9UHI5 535 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 DUSP13Q9UII6 198 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 GPR160Q9UJ42 338 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 FBXL3Q9UKT7 428 aa8.01□□□□□ -1.13
NEDD9-203ENST00000397378 BIRC6Q9NR09 4857 aa8□□□□□ -1.13
NEDD9-203ENST00000397378 IGLV3-9A0A075B6K5 115 aa8□□□□□ -1.13
NEDD9-203ENST00000397378 PPIAL4EA0A075B759 164 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms