RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SCAIQ8N9R8 606 aa11.85□□□□□ -0.51
SEC13-209ENST00000397117 OR4Q3Q8NH05 313 aa11.85□□□□□ -0.51
SEC13-209ENST00000397117 ZNF417Q8TAU3 575 aa11.85□□□□□ -0.51
SEC13-209ENST00000397117 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
SEC13-209ENST00000397117 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
SEC13-209ENST00000397117 KLHL15Q96M94 604 aa11.85□□□□□ -0.51
SEC13-209ENST00000397117 ZNF587Q96SQ5 575 aaPredicted RBP11.85□□□□□ -0.51
SEC13-209ENST00000397117 ALKBH4Q9NXW9 302 aa11.85□□□□□ -0.51
SEC13-209ENST00000397117 MRPL39Q9NYK5 338 aaKnown RBP11.85□□□□□ -0.51
SEC13-209ENST00000397117 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
SEC13-209ENST00000397117 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
SEC13-209ENST00000397117 FTCDNL1E5RQL4 147 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 E9PLN8 166 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 M0R129 80 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 BHLHE40O14503 412 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 TFECO14948 347 aaPredicted RBP11.84□□□□□ -0.51
SEC13-209ENST00000397117 RNF13O43567 381 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 PPP1R3DO95685 299 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 CELA3AP09093 270 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 ADORA3P0DMS8 318 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 ZNF24P17028 368 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 AHCYP23526 432 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 SHC1P29353 583 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 UQCRC1P31930 480 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 GRK5P34947 590 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 GFRA1P56159 465 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 CSNK2A1P68400 391 aaPredicted RBP11.84□□□□□ -0.51
SEC13-209ENST00000397117 SLC35A1P78382 337 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 RPL18Q07020 188 aaKnown RBP11.84□□□□□ -0.51
SEC13-209ENST00000397117 CDK5R2Q13319 367 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
SEC13-209ENST00000397117 TMPPEQ6ZT21 453 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 H1FNTQ75WM6 255 aaPredicted RBP11.84□□□□□ -0.51
SEC13-209ENST00000397117 FGD2Q7Z6J4 655 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 IGFN1Q86VF2 1251 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 LNX2Q8N448 690 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 TCEANCQ8N8B7 351 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 OR8J1Q8NGP2 316 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 MOSPD2Q8NHP6 518 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 RHOXF1Q8NHV9 184 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 CNIH3Q8TBE1 160 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 UBE2FQ969M7 185 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 IL4I1Q96RQ9 567 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 VKORC1Q9BQB6 163 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 POLDIP3Q9BY77 421 aaKnown RBP11.84□□□□□ -0.51
SEC13-209ENST00000397117 LDAHQ9H6V9 325 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 EXO5Q9H790 373 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 ACKR4Q9NPB9 350 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 CLN6Q9NWW5 311 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 MYRFQ9Y2G1 1151 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 SLC6A5Q9Y345 797 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 MPDZO75970 2070 aa11.84□□□□□ -0.51
SEC13-209ENST00000397117 A6NHS1 94 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 MCIDASD6RGH6 385 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 C11orf98E9PRG8 122 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 PLPP3O14495 311 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 SEC14L5O43304 696 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 TLX2O43763 284 aaPredicted RBP11.83□□□□□ -0.52
SEC13-209ENST00000397117 SMNDC1O75940 238 aaKnown RBP eCLIP11.83□□□□□ -0.52
SEC13-209ENST00000397117 TNFAIP8O95379 198 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 PMS2P2O95744 297 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 IFNGP01579 166 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 DIO1P49895 249 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 CTXN1P60606 82 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 SNRPGP62308 76 aaKnown RBP11.83□□□□□ -0.52
SEC13-209ENST00000397117 CTU2Q2VPK5 515 aaKnown RBP11.83□□□□□ -0.52
SEC13-209ENST00000397117 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 SLC35F1Q5T1Q4 408 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 ARHGAP11AQ6P4F7 1023 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 GHDCQ8N2G8 530 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 FBLIM1Q8WUP2 373 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 HDAC2Q92769 488 aaKnown RBP11.83□□□□□ -0.52
SEC13-209ENST00000397117 Q96MT0 163 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 ERMAPQ96PL5 475 aaPredicted RBP11.83□□□□□ -0.52
SEC13-209ENST00000397117 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
SEC13-209ENST00000397117 DEFB127Q9H1M4 99 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 SLC6A15Q9H2J7 730 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 ZNF696Q9H7X3 374 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 ZNF226Q9NYT6 803 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 TAS2R5Q9NYW4 299 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 SEC14L4Q9UDX3 406 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 B3GALT5Q9Y2C3 310 aa11.83□□□□□ -0.52
SEC13-209ENST00000397117 RIIAD1A6NNX1 92 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 EIF1AYO14602 144 aaKnown RBP11.82□□□□□ -0.52
SEC13-209ENST00000397117 TNFSF11O14788 317 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 SURF4O15260 269 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 IDH3BO43837 385 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 PRKYO43930 277 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 AKR7A3O95154 331 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 F13BP05160 661 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 CD14P08571 375 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 TSPAN19P0C672 248 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 ABOP16442 354 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 ERVK-25P63136 954 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 HSF1Q00613 529 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 PUDPQ08623 228 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 C6orf141Q5SZD1 244 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 PDSS1Q5T2R2 415 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 ESPNLQ6ZVH7 1005 aa11.82□□□□□ -0.52
SEC13-209ENST00000397117 UBQLNLQ8IYU4 475 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms