RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CARM1Q86X55 608 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 DHRSXQ8N5I4 330 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 ZNF433Q8N7K0 673 aaPredicted RBP12.85□□□□□ -0.35
SEC13-208ENST00000397109 OR9K2Q8NGE7 335 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 OR2T29Q8NH02 315 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 SLC38A4Q969I6 547 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 MUCL1Q96DR8 90 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 PLPPR2Q96GM1 343 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 YTHDF1Q9BYJ9 559 aaKnown RBP12.85□□□□□ -0.35
SEC13-208ENST00000397109 UPB1Q9UBR1 384 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 CIB4A0PJX0 185 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 EI24O14681 340 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 ZNF682O95780 498 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 ALPLP05186 524 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 CD53P19397 219 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 MYF6P23409 242 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 NTF4P34130 210 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 EGR4Q05215 589 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 MFSD13AQ14CX5 517 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 ACKR1Q16570 336 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 C6orf52Q5T4I8 152 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 FAM69AQ5T7M9 428 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 SHQ1Q6PI26 577 aaKnown RBP12.85□□□□□ -0.35
SEC13-208ENST00000397109 C20orf204Q6ZNR8 217 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 GPAT4Q86UL3 456 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 FAM86B1Q8N7N1 296 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 PROX1Q92786 737 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 PIGTQ969N2 578 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 SLC25A36Q96CQ1 311 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 HS3ST6Q96QI5 342 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 EPYCQ99645 322 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 ADI1Q9BV57 179 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 ESRP2Q9H6T0 727 aaKnown RBP12.85□□□□□ -0.35
SEC13-208ENST00000397109 ZNF696Q9H7X3 374 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
SEC13-208ENST00000397109 TAS2R16Q9NYV7 291 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 V9GYQ6 96 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 DSCAMO60469 2012 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 MED13LQ71F56 2210 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 ARID1AO14497 2285 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 CADP27708 2225 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 HIVEP1P15822 2718 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 TRAV36DV7A0A075B6V5 113 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 A0A087WUJ7 227 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 A0A0B4J2E0 115 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 A0A1B0GX12 115 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 FTCDNL1E5RQL4 147 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 PDLIM1O00151 329 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 DLGAP1O14490 977 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 FZD7O75084 574 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 IGHV3-9P01782 118 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 CAPGP40121 348 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
SEC13-208ENST00000397109 P2RY4P51582 365 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 PPP2R2BQ00005 443 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 FAPQ12884 760 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 STK11Q15831 433 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 TTC23Q5W5X9 447 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 OR7E24Q6IFN5 339 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 KRT80Q6KB66 452 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 ALKBH2Q6NS38 261 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 ZNF613Q6PF04 617 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
SEC13-208ENST00000397109 AAED1Q7RTV5 226 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 ABHD12BQ7Z5M8 362 aaPredicted RBP12.84□□□□□ -0.35
SEC13-208ENST00000397109 POMGNT2Q8NAT1 580 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 OR6S1Q8NH40 331 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 RNF217Q8TC41 542 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 MAGEE2Q8TD90 523 aaPredicted RBP12.84□□□□□ -0.35
SEC13-208ENST00000397109 KTI12Q96EK9 354 aaPredicted RBP12.84□□□□□ -0.35
SEC13-208ENST00000397109 HSH2DQ96JZ2 352 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 CNBD2Q96M20 576 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 MCHR1Q99705 422 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 TMEM204Q9BSN7 226 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 PTDSS2Q9BVG9 487 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 PRR14Q9BWN1 585 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 GABARAPL1Q9H0R8 117 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 UBTD1Q9HAC8 227 aa12.84□□□□□ -0.35
SEC13-208ENST00000397109 ITPR3Q14573 2671 aa12.83□□□□□ -0.35
SEC13-208ENST00000397109 OR5H1A6NKK0 313 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 RAD23AP54725 363 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 PPA1Q15181 289 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 IFI44LQ53G44 452 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 NCMAPQ5T1S8 102 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 C1QTNF12Q5T7M4 302 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 CREB3L2Q70SY1 520 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 ZIC4Q8N9L1 334 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 GEMIN6Q8WXD5 167 aaKnown RBP12.83□□□□□ -0.36
SEC13-208ENST00000397109 TAAR8Q969N4 342 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 C7orf34Q96L11 122 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 WFDC6Q9BQY6 131 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 SLC7A10Q9NS82 523 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 UBAP1Q9NZ09 502 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 NDUFA13Q9P0J0 144 aa12.83□□□□□ -0.36
SEC13-208ENST00000397109 B3GALT5Q9Y2C3 310 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms