RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CLIP3Q96DZ5 547 aa14.31□□□□□ -0.12
HOXA3-202ENST00000396352 TCF7L1Q9HCS4 588 aa14.31□□□□□ -0.12
HOXA3-202ENST00000396352 HCN3Q9P1Z3 774 aa14.31□□□□□ -0.12
HOXA3-202ENST00000396352 SCML1Q9UN30 329 aa14.31□□□□□ -0.12
HOXA3-202ENST00000396352 ETV7Q9Y603 341 aa14.31□□□□□ -0.12
HOXA3-202ENST00000396352 OR2A4O95047 310 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 PSMD4P55036 377 aaKnown RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 ALKBH1Q13686 389 aaKnown RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 CBFBQ13951 182 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 NHLRC3Q5JS37 347 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 SIX5Q8N196 739 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 OMA1Q96E52 524 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 RBM18Q96H35 190 aaKnown RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 MOGAT1Q96PD6 335 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 OR2A7Q96R45 310 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 TCEAL2Q9H3H9 227 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 HIF3AQ9Y2N7 669 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 SPTBP11277 2137 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 A0A0A6YYC8 382 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 OR2W5A6NFC9 320 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 BLOC1S5-TXNDC5H3BN57 136 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 I3L1I5 382 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 DCTN6O00399 190 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 LDOC1O95751 146 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 ST6GAL1P15907 406 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 SOX2P48431 317 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 ZNF267Q14586 743 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 C16orf52Q8NHV5 167 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 A0A1B0GTH9 108 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 CREBL2O60519 120 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 PRAMEF2O60811 474 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 EGFP01133 1207 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 IFNA16P05015 189 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 CELA2BP08218 269 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 RAB14P61106 215 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 ZNF74Q16587 644 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 KCTD20Q7Z5Y7 419 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 JAZF1Q86VZ6 243 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 CDC20BQ86Y33 519 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 ADGRG3Q86Y34 549 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 LSM14AQ8ND56 463 aaKnown RBP14.3□□□□□ -0.12
HOXA3-202ENST00000396352 SLC37A2Q8TED4 501 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 ELMOD3Q96FG2 381 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 SFXN2Q96NB2 322 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 IGFLR1Q9H665 355 aa14.3□□□□□ -0.12
HOXA3-202ENST00000396352 SPTBN5Q9NRC6 3674 aaKnown RBP14.29□□□□□ -0.12
HOXA3-202ENST00000396352 TRAV8-7A0A075B6U6 113 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 GLSO94925 669 aaPredicted RBP14.29□□□□□ -0.12
HOXA3-202ENST00000396352 IL5P05113 134 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 TACSTD2P09758 323 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 HTR4Q13639 388 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 KLHL26Q53HC5 615 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 NHLRC1Q6VVB1 395 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 HDDC2Q7Z4H3 204 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 FAM220AQ7Z4H9 259 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 SPERTQ8NA61 448 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 CCDC74AQ96AQ1 378 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 MRGPRX1Q96LB2 322 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 TUBAL3A6NHL2 446 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 SNRPGP15A8MWD9 76 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 TPD52L2O43399 206 aaKnown RBP14.29□□□□□ -0.12
HOXA3-202ENST00000396352 MAPK3P27361 379 aaPredicted RBP14.29□□□□□ -0.12
HOXA3-202ENST00000396352 BTG2P78543 158 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 OR5M10Q6IEU7 315 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 CHMP1BQ7LBR1 199 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 ATG4DQ86TL0 474 aaPredicted RBP14.29□□□□□ -0.12
HOXA3-202ENST00000396352 MEIOBQ8N635 442 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 GPBAR1Q8TDU6 330 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 LIPHQ8WWY8 451 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 LMF1Q96S06 567 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 GAS2L1Q99501 681 aaPredicted RBP14.29□□□□□ -0.12
HOXA3-202ENST00000396352 SLITRK2Q9H156 845 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 ZNF224Q9NZL3 707 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 KIF25Q9UIL4 384 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 MOKQ9UQ07 419 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 F5P12259 2224 aa14.29□□□□□ -0.12
HOXA3-202ENST00000396352 OIP5O43482 229 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 CD14P08571 375 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 ITPKBP27987 946 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 SDHAP31040 664 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 PSMA6P60900 246 aaKnown RBP14.28□□□□□ -0.12
HOXA3-202ENST00000396352 RAP2BP61225 183 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 ERV3-1Q14264 604 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 GPAT4Q86UL3 456 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 TMPRSS12Q86WS5 348 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 ZNF595Q8IYB9 648 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 SLC22A18ASQ8N1D0 253 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 ZSCAN1Q8NBB4 408 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 OR52B4Q8NGK2 314 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 ZNF524Q96C55 264 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 ADAD1Q96M93 576 aaKnown RBP14.28□□□□□ -0.12
HOXA3-202ENST00000396352 TMPRSS13Q9BYE2 586 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 DZANK1Q9NVP4 752 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 ERVK-19Q9WJR5 959 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 VSIG10L2P0DP72 767 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 APEHP13798 732 aaKnown RBP14.28□□□□□ -0.12
HOXA3-202ENST00000396352 GRK6P43250 576 aa14.28□□□□□ -0.12
HOXA3-202ENST00000396352 MAT1AQ00266 395 aaKnown RBP14.28□□□□□ -0.12
HOXA3-202ENST00000396352 DMWDQ09019 674 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms