RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MTFR2Q6P444 385 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 ANKRD16Q6P6B7 361 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 GSG1LQ6UXU4 331 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 TMUB2Q71RG4 321 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 EIF4E3Q8N5X7 224 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 FAM3CQ92520 227 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 ALX4Q9H161 411 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 WDR76Q9H967 626 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 C2orf42Q9NWW7 574 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 LAMP5Q9UJQ1 280 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 ADAM18Q9Y3Q7 739 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 OR10H1Q9Y4A9 318 aa9.17□□□□□ -0.94
UBE2D3-208ENST00000394803 SCN3AQ9NY46 2000 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 A6NCN8 305 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 RFXAPO00287 272 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ADRB1P08588 477 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 CTRB1P17538 263 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 CXCL2P19875 107 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ENPP1P22413 925 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ADH7P40394 386 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 SOX9P48436 509 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ERVK-25P63136 954 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 GPR18Q14330 331 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 HLXQ14774 488 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ALG10Q5BKT4 473 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 LINC01590Q5TEZ4 76 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 CTRB2Q6GPI1 263 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 TANGO2Q6ICL3 276 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 RGS7BPQ6MZT1 257 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ARMC6Q6NXE6 501 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 KANSL1Q7Z3B3 1105 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 DGLUCYQ7Z3D6 616 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ZAR1Q86SH2 424 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 CDC20BQ86Y33 519 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ZNF676Q8N7Q3 588 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 OR2AK2Q8NG84 335 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 TNFAIP8L1Q8WVP5 186 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 CCDC74AQ96AQ1 378 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 TOE1Q96GM8 510 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 VSTM2LQ96N03 204 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 DGAT2Q96PD7 388 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 POTEKPQ9BYX7 375 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 MTIF3Q9H2K0 278 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 SLCO5A1Q9H2Y9 848 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 CAPN10Q9HC96 672 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 C12orf4Q9NQ89 552 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 EXOSC3Q9NQT5 275 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 PRODH2Q9UF12 536 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 OPN4Q9UHM6 478 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ZNF107Q9UII5 783 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 TRBV5-7A0A0A0MS05 114 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 KIR2DS5A0A0G2JLQ3 304 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 A0A0G2JNG1 304 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 KIR2DS3K7RE56 304 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 MAGEB4O15481 346 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 TSPAN9O75954 239 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 RASGRP1O95267 797 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 PMS2P2O95744 297 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 MELTFP08582 738 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 HOXD4P09016 255 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 UBBP0CG47 229 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 UBCP0CG48 685 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 RPA2P15927 270 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ITPKBP27987 946 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 DCTDP32321 178 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 NANOS3P60323 173 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 RPS27AP62979 156 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 UBA52P62987 128 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 EIF2B5Q13144 721 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 KIR2DS5Q14953 304 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 LIPNQ5VXI9 398 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 LPCAT3Q6P1A2 487 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 C11orf88Q6PI97 169 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 RD3Q7Z3Z2 195 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 LRRTM1Q86UE6 522 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 SERPINA12Q8IW75 414 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 C10orf53Q8N6V4 93 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 C12orf76Q8N812 135 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 TMEM52Q8NDY8 209 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ASB17Q8WXJ9 295 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 C3orf49Q96BT1 292 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 GABRG3Q99928 467 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 SEMA4CQ9C0C4 833 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ARL6Q9H0F7 186 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 SLC25A32Q9H2D1 315 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 SCPEP1Q9HB40 452 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 ANKRD10Q9NXR5 420 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 GRHPRQ9UBQ7 328 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 MRTO4Q9UKD2 239 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 IKZF2Q9UKS7 526 aa9.16□□□□□ -0.94
UBE2D3-208ENST00000394803 NUP210LQ5VU65 1888 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 A0A0D9SG52 128 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 A0A1B0GVT2 93 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 GGT3PA6NGU5 568 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 A8MXK9 166 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 UPK3AO75631 287 aa9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 RPP14O95059 124 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-208ENST00000394803 EML2O95834 649 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms