RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TACR3P29371 465 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 LCN1P31025 176 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SLC1A3P43003 542 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 CTBP2P56545 445 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 EFNB1P98172 346 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 RUNX1T1Q06455 604 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 EFR3AQ14156 821 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 QPRTQ15274 297 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 GXYLT1Q4G148 440 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SYT14P1Q58G82 188 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 Q5BKY6 102 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 MEDAGQ5VYS4 303 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 MZT2BQ6NZ67 158 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 FAM122CQ6P4D5 195 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SLC38A6Q8IZM9 456 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 STX19Q8N4C7 294 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 C10orf53Q8N6V4 93 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR2T33Q8NG76 320 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR10G3Q8NGC4 313 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR8K3Q8NH51 312 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR5W2Q8NH69 310 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ELP5Q8TE02 316 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OIT3Q8WWZ8 545 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OTULINQ96BN8 352 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SLC38A2Q96QD8 506 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ZPBPQ9BS86 351 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 CENPOQ9BU64 300 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 POLDIP3Q9BY77 421 aaKnown RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 SPRY4Q9C004 299 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ZNF700Q9H0M5 742 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SLC25A19Q9HC21 320 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 TAS2R16Q9NYV7 291 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ICAM5Q9UMF0 924 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 FARSAQ9Y285 508 aaKnown RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 SIGLEC7Q9Y286 467 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 TMEM5Q9Y2B1 443 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 PCDHGB7Q9Y5F8 929 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 KCNMB2Q9Y691 235 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 NUP210LQ5VU65 1888 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ZNF292O60281 2723 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 A0A1W2PQD3 144 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 TUBAL3A6NHL2 446 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 FAM183AA6NL82 134 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 LEUTXA8MZ59 168 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 SOCS6O14544 535 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ADAM10O14672 748 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 SURF4O15260 269 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 EIF4E2O60573 245 aaKnown RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 PTP4A3O75365 173 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 SLC43A1O75387 559 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ITGA10O75578 1167 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 RCBTB2O95199 551 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 CYC1P08574 325 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 PNMTP11086 282 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 BMP7P18075 431 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 F8A1P23610 371 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 TALDO1P37837 337 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 SLC6A8P48029 635 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 CTAG1AP78358 180 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 MAB21L1Q13394 359 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ZNF79Q15937 498 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 EXT1Q16394 746 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 COL28A1Q2UY09 1125 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 PGGHGQ32M88 737 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 HSD17B12Q53GQ0 312 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ZBTB37Q5TC79 503 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 PLAG1Q6DJT9 500 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ALKBH2Q6NS38 261 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 NDUFAF7Q7L592 441 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 PPP1R32Q7Z5V6 425 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ATG4DQ86TL0 474 aaPredicted RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 FAM26EQ8N5C1 309 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 WDR36Q8NI36 951 aaKnown RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 LHFPL5Q8TAF8 219 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 TMEM163Q8TC26 289 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 BRIX1Q8TDN6 353 aaKnown RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 DEDD2Q8WXF8 326 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 SNAPC3Q92966 411 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 HGDQ93099 445 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 SGTBQ96EQ0 304 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 TMEM80Q96HE8 168 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 Q96MT0 163 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 ZNF582Q96NG8 517 aaPredicted RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 RASL10BQ96S79 203 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 MGLLQ99685 303 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 TTYH2Q9BSA4 534 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 IFT27Q9BW83 186 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 KCNN2Q9H2S1 579 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 MCCC2Q9HCC0 563 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 RANGRFQ9HD47 186 aaPredicted RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 MED11Q9P086 117 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 CMAHPQ9Y471 501 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 COL5A1P20908 1838 aaPredicted RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 PTPRZ1P23471 2315 aaPredicted RBP6.29□□□□□ -1.4
RTN4-205ENST00000394609 DMXL1Q9Y485 3027 aa6.29□□□□□ -1.4
RTN4-205ENST00000394609 LOC100506127A0A0U1RQW1 187 aa6.28□□□□□ -1.4
RTN4-205ENST00000394609 A0A0X1KG70 313 aa6.28□□□□□ -1.4
RTN4-205ENST00000394609 A0A1W2PQ09 198 aa6.28□□□□□ -1.4
RTN4-205ENST00000394609 SNTNA6NMZ2 147 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms