RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TXNDC12O95881 172 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 PTTG1O95997 202 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 APEHP13798 732 aaKnown RBP13.61□□□□□ -0.23
GPC3-202ENST00000394299 PRKCAP17252 672 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 ELK1P19419 428 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 EVX1P49640 407 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 TAS2R43P59537 309 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 XKRXQ6PP77 449 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 GRINAQ7Z429 371 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 TIGD4Q8IY51 512 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 SYS1Q8N2H4 156 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 C7orf57Q8NEG2 295 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 OR5M1Q8NGP8 315 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 ZNF417Q8TAU3 575 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 HPS1Q92902 700 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 SMIM19Q96E16 107 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 ZNF587Q96SQ5 575 aaPredicted RBP13.61□□□□□ -0.23
GPC3-202ENST00000394299 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 CLEC4AQ9UMR7 237 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 PCDHGB7Q9Y5F8 929 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 A8MVM7 634 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 GAAP10253 952 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 GALP22466 123 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 THBS2P35442 1172 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 SLC25A1P53007 311 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 DEFA1P59665 94 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 DEFA3P59666 94 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 PPP3R1P63098 170 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 CCDC157Q569K6 752 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 C1QTNF12Q5T7M4 302 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 FAM69AQ5T7M9 428 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 TMEM205Q6UW68 189 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 MAMDC2Q7Z304 686 aaPredicted RBP13.61□□□□□ -0.23
GPC3-202ENST00000394299 DPY19L4Q7Z388 723 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 BMPERQ8N8U9 685 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 NUBPLQ8TB37 319 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 PPP1R14BQ96C90 147 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 ZC3H10Q96K80 434 aaKnown RBP13.61□□□□□ -0.23
GPC3-202ENST00000394299 AMELYQ99218 206 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 TSPAN10Q9H1Z9 355 aaPredicted RBP13.61□□□□□ -0.23
GPC3-202ENST00000394299 PPP1R3EQ9H7J1 279 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 MYOTQ9UBF9 498 aa13.61□□□□□ -0.23
GPC3-202ENST00000394299 HTR3EA5X5Y0 456 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 ANKRD61A6NGH8 418 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 FAM25AB3EWG3 89 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 FAM25CB3EWG5 89 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 FAM25GB3EWG6 89 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 NTN3O00634 580 aaPredicted RBP13.6□□□□□ -0.23
GPC3-202ENST00000394299 EFNA2O43921 213 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 FGF5P12034 268 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 CENPAP49450 140 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 CLDN6P56747 220 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 ACTA2P62736 377 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 ACTG2P63267 376 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 IL10RAQ13651 578 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 IL18Q14116 193 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 ZNF684Q5T5D7 378 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 LRRC69Q6ZNQ3 347 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 OR6N2Q8NGY6 317 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 SOSTQ9BQB4 213 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 INIPQ9NRY2 104 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 KLRF1Q9NZS2 232 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 MRM2Q9UI43 246 aaKnown RBP13.6□□□□□ -0.23
GPC3-202ENST00000394299 PPIEQ9UNP9 301 aaKnown RBP13.6□□□□□ -0.23
GPC3-202ENST00000394299 H3BML4 177 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 C17orf67Q0P5P2 114 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 C19orf57Q0VDD7 668 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 EFR3AQ14156 821 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 SFXN4Q6P4A7 337 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 LYPD8Q6UX82 237 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 SLC16A9Q7RTY1 509 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 MR1Q95460 341 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 MMP28Q9H239 520 aa13.6□□□□□ -0.23
GPC3-202ENST00000394299 AK6Q9Y3D8 172 aaKnown RBP13.6□□□□□ -0.23
GPC3-202ENST00000394299 ACOD1A6NK06 481 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 PLPP3O14495 311 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 SNPHO15079 494 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 PIN1P1O15428 100 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 ZFAND5O76080 213 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 ZFPL1O95159 310 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 EIF4EP06730 217 aaKnown RBP13.59□□□□□ -0.23
GPC3-202ENST00000394299 MYL9P24844 172 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 PTGDSP41222 190 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 INSM1Q01101 510 aaPredicted RBP13.59□□□□□ -0.23
GPC3-202ENST00000394299 FOXF1Q12946 379 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 SGCBQ16585 318 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 ODF4Q2M2E3 257 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 BTBD16Q32M84 506 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 LIPNQ5VXI9 398 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 RPL22L1Q6P5R6 122 aaKnown RBP13.59□□□□□ -0.23
GPC3-202ENST00000394299 MS4A15Q8N5U1 240 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 OR5H6Q8NGV6 325 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 THEM6Q8WUY1 208 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 PMS2P1A4D2B8 440 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 PLA2G10O15496 165 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 DXOO77932 396 aaKnown RBP13.59□□□□□ -0.23
GPC3-202ENST00000394299 CER1O95813 267 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 ONECUT2O95948 504 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 RENP00797 406 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms