RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 H0YIV9 168 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 H3BVH4 76 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 GATCO43716 136 aaKnown RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 ADRA2CP18825 462 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 UBE2IP63279 158 aaKnown RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 ZNF485Q8NCK3 441 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 KCNK12Q9HB15 430 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 MED17Q9NVC6 651 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 PLRG1O43660 514 aaKnown RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 FAM163BP0C2L3 166 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 CD1EP15812 388 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 NAGAP17050 411 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 RNF175Q8N4F7 328 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 TMEM175Q9BSA9 504 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 EDEM2Q9BV94 578 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 WDR61Q9GZS3 305 aaKnown RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 SLC6A20Q9NP91 592 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 POLLQ9UGP5 575 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 KDM4FA0A1W2PPD8 638 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ELLP55199 621 aaPredicted RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 CSNK1G2P78368 415 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ELOBQ15370 118 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ABHD17BQ5VST6 288 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 NCR3LG1Q68D85 454 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 OR6K3Q8NGY3 331 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 DPH1Q9BZG8 443 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 GPR62Q9BZJ7 368 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ARNT2Q9HBZ2 717 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 CNIH4Q9P003 139 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 LAMP3Q9UQV4 416 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 AQP7O14520 342 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 DNPH1O43598 174 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 TOR2AQ5JU69 321 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 NCBP2-AS2Q69YL0 99 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 FDX2Q6P4F2 183 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 PDZD3Q86UT5 571 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 OR9Q2Q8NGE9 314 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 TMEM19Q96HH6 336 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ST6GALNAC4Q9H4F1 302 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 CNMDO75829 334 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 FGF3P11487 239 aaPredicted RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 G6PCP35575 357 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 TGFBR1P36897 503 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 GDNFP39905 211 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 WDR88Q6ZMY6 472 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 WWTR1Q9GZV5 400 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 DCAF13Q9NV06 445 aaKnown RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 MED16Q9Y2X0 877 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ZNF280AP59817 542 aaPredicted RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 TMEM163Q8TC26 289 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 MBD3L1Q8WWY6 194 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 MBOAT4Q96T53 435 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 MUTYHQ9UIF7 546 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 CSNK1G3Q9Y6M4 447 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 MYOCOSA0A1B0GUC4 107 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 APEX1P27695 318 aaKnown RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 BTNL3Q6UXE8 466 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 MEPCEQ7L2J0 689 aaKnown RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 DNAJA3Q96EY1 480 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ZNF395Q9H8N7 513 aaPredicted RBP12.51□□□□□ -0.41
USP49-203ENST00000394253 OR1A1Q9P1Q5 309 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 FLVCR2Q9UPI3 526 aa12.51□□□□□ -0.41
USP49-203ENST00000394253 ANTXRLA6NF34 631 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 RNASET2O00584 256 aaKnown RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 EPHA5P54756 1037 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 EMP3P54852 163 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 BTG1P62324 171 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 CLDN19Q8N6F1 224 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 LOC100289279A0A1B0GTE1 492 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 ZNF732B4DXR9 585 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 CD63P08962 238 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 ATXN1LP0C7T5 689 aaKnown RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 SQSTM1Q13501 440 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 VEZF1Q14119 521 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 MBTPS1Q14703 1052 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 ADGRE4PQ86SQ3 457 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 TMEM139Q8IV31 216 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 KIAA1456Q9P272 454 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 UBR1Q8IWV7 1749 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 TMEM269A0A1B0GVZ9 245 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 OR5K3A6NET4 321 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 M0R1X1 148 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 ADPRHP54922 357 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 NNATQ16517 81 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 TMEM135Q86UB9 458 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 LAX1Q8IWV1 398 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 KIAA1958Q8N8K9 716 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 MRPL13Q9BYD1 178 aaKnown RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 NFAT5O94916 1531 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms