RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PRTGQ2VWP7 1150 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 ELOA3BQ3SY89 546 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 FAAP20Q6NZ36 180 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 LRRTM1Q86UE6 522 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 ZNF440Q8IYI8 595 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 SLC22A18ASQ8N1D0 253 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 LSM14AQ8ND56 463 aaKnown RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 ELOA3Q8NG57 546 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 LIPHQ8WWY8 451 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 ADAD1Q96M93 576 aaKnown RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 MOGAT1Q96PD6 335 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 CHIAQ9BZP6 476 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 FKRPQ9H9S5 495 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 PRTFDC1Q9NRG1 225 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 TAS2R5Q9NYW4 299 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 MOKQ9UQ07 419 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 M0R233 179 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 IGF2P01344 180 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 APEHP13798 732 aaKnown RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 CPN1P15169 458 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 IFNGR1P15260 489 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 CTHP32929 405 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 MAT1AQ00266 395 aaKnown RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 ATG4DQ86TL0 474 aaPredicted RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 MCATQ8IVS2 390 aaKnown RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 ZNF595Q8IYB9 648 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 LRRC20Q8TCA0 184 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 HMGB4Q8WW32 186 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 CCNL2Q96S94 520 aaPredicted RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 OR10A5Q9H207 317 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 CA10Q9NS85 328 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 KCNN3Q9UGI6 736 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 MRPS33Q9Y291 106 aaKnown RBP17.16■□□□□ 0.34
CBX1-202ENST00000393408 MAB21L2Q9Y586 359 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 PCDHGA5Q9Y5G8 931 aa17.16■□□□□ 0.34
CBX1-202ENST00000393408 LDOC1O95751 146 aaPredicted RBP17.15■□□□□ 0.34
CBX1-202ENST00000393408 SOX2P48431 317 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 FUT7Q11130 342 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 WBP2NLQ6ICG8 309 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 GATSQ8NAP1 163 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 AVL9Q8NBF6 648 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 THEM6Q8WUY1 208 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 GAS2L1Q99501 681 aaPredicted RBP17.15■□□□□ 0.34
CBX1-202ENST00000393408 CDCA3Q99618 268 aaPredicted RBP17.15■□□□□ 0.34
CBX1-202ENST00000393408 SLC6A5Q9Y345 797 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 OR5K4A6NMS3 321 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 OIP5O43482 229 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 PNMTP11086 282 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 ZNF250P15622 560 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 SDHAP31040 664 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 MECP2P51608 486 aaKnown RBP17.15■□□□□ 0.34
CBX1-202ENST00000393408 CTXN1P60606 82 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 AANATQ16613 207 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 ALG10Q5BKT4 473 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 ZNF542PQ5EBM4 170 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 DNM1P46Q6ZS02 220 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 CDC20BQ86Y33 519 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 SLC38A6Q8IZM9 456 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 C10orf53Q8N6V4 93 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 ZNF615Q8N8J6 731 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 C19orf47Q8N9M1 422 aaKnown RBP17.15■□□□□ 0.34
CBX1-202ENST00000393408 C15orf40Q8WUR7 153 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 NUP50Q9UKX7 468 aa17.15■□□□□ 0.34
CBX1-202ENST00000393408 PPIEQ9UNP9 301 aaKnown RBP17.15■□□□□ 0.34
CBX1-202ENST00000393408 LOC105371267A0A1B0GV96 52 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 PLSCR5A0PG75 271 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 B8ZZF3 427 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 DCTN6O00399 190 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 NDUFB6O95139 128 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 IL5P05113 134 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 GIPP09681 153 aaPredicted RBP17.14■□□□□ 0.33
CBX1-202ENST00000393408 RRASP10301 218 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 ANXA7P20073 488 aaKnown RBP17.14■□□□□ 0.33
CBX1-202ENST00000393408 CBFBQ13951 182 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 FNDC7Q5VTL7 733 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 ZNF626Q68DY1 528 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 ARMC6Q6NXE6 501 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 DNAAF1Q8NEP3 725 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 LMF1Q96S06 567 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 MMP25Q9NPA2 562 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 ZNF69Q9UC07 566 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 YBX2Q9Y2T7 364 aaKnown RBP17.14■□□□□ 0.33
CBX1-202ENST00000393408 HS3ST3A1Q9Y663 406 aa17.14■□□□□ 0.33
CBX1-202ENST00000393408 GLSO94925 669 aaPredicted RBP17.13■□□□□ 0.33
CBX1-202ENST00000393408 TXNDC12O95881 172 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 ALDOBP05062 364 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 TMIGD3P0DMS9 266 aaPredicted RBP17.13■□□□□ 0.33
CBX1-202ENST00000393408 MAOAP21397 527 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 RAB14P61106 215 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 RIPPLY1Q0D2K3 151 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 OPCMLQ14982 345 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 CD226Q15762 336 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 SMUG1Q53HV7 270 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 LRRN1Q6UXK5 716 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 ZSCAN1Q8NBB4 408 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 CCDC74AQ96AQ1 378 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 GSX2Q9BZM3 304 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 SRA1Q9HD15 236 aaKnown RBP17.13■□□□□ 0.33
CBX1-202ENST00000393408 A0A1B0GTH9 108 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 BLACEA4D250 179 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms