RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 FLOT2Q14254 428 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 ANKDD1AQ495B1 522 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 OR7E24Q6IFN5 339 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 SLC35D2Q76EJ3 337 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 HDDC2Q7Z4H3 204 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 TMEM200AQ86VY9 491 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 P2RY8Q86VZ1 359 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 TMEM123Q8N131 208 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 GPR137CQ8N3F9 429 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 C1orf162Q8NEQ5 155 aaPredicted RBP13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 OR52J3Q8NH60 311 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 HSD17B8Q92506 261 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 ADAD1Q96M93 576 aaKnown RBP13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 ALKBH3Q96Q83 286 aaPredicted RBP13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 OR2M2Q96R28 347 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 CADM1Q9BY67 442 aaKnown RBP13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 NDEL1Q9GZM8 345 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 MMADHCQ9H3L0 296 aaPredicted RBP13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 B3GAT2Q9NPZ5 323 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 MED29Q9NX70 200 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 HIF3AQ9Y2N7 669 aa13.25□□□□□ -0.29
IGHV3-53-201ENST00000390627 A0A1W2PRG6 482 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 FAM221AA4D161 298 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 SLC35F4A4IF30 521 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 MCIDASD6RGH6 385 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 CTAG2O75638 210 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 KRT36O76013 467 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 TSPAN19P0C672 248 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 RAP2AP10114 183 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 IFNGR1P15260 489 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 MAKP20794 623 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 AQP2P41181 271 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 GPR4P46093 362 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 DAP3P51398 398 aaKnown RBP13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 CBX1P83916 185 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 STK11Q15831 433 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 TIMM23BQ5SRD1 257 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 HMBOX1Q6NT76 420 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 TBPL2Q6SJ96 375 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 NHLRC1Q6VVB1 395 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 CCDC121Q6ZUS5 278 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 TMPRSS11FQ6ZWK6 438 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 OAFQ86UD1 273 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 C17orf78Q8N4C9 275 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 OR4K5Q8NGD3 323 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 OR6X1Q8NH79 312 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 MUCL1Q96DR8 90 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 TXNDC15Q96J42 360 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 LRR1Q96L50 414 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 EMC6Q9BV81 110 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 LRMDAQ9H2I8 198 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 NGBQ9NPG2 151 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 INIPQ9NRY2 104 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 RASSF1Q9NS23 344 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 TMCC3Q9ULS5 477 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 POMPQ9Y244 141 aa13.24□□□□□ -0.29
IGHV3-53-201ENST00000390627 DHRS12A0PJE2 317 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 SH3PXD2BA1X283 911 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 NPIPB13A6NJU9 1138 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 OR5H1A6NKK0 313 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 NPIPB4C9JG80 1138 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 EBAG9O00559 213 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 CLOCKO15516 846 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 UPK3AO75631 287 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 BCL10O95999 233 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 F13BP05160 661 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 THBDP07204 575 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 HOXC12P31275 282 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 IFNGR2P38484 337 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 SH3BGRP55822 239 aaPredicted RBP13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 BIDP55957 195 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 PRPS1P60891 318 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 RPS4XP62701 263 aaKnown RBP13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 ROR2Q01974 943 aaKnown RBP13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 LGALS3BPQ08380 585 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 CAMK2DQ13557 499 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 TAF11Q15544 211 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 TAB1Q15750 504 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 ALG10Q5BKT4 473 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 BEX5Q5H9J7 111 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 C1QTNF12Q5T7M4 302 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 C9orf135Q5VTT2 229 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 CARD17Q5XLA6 110 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 SPATA24Q86W54 205 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 WFDC8Q8IUA0 241 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 C20orf196Q8IYI0 205 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 OR6N1Q8NGY5 312 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 MOSPD2Q8NHP6 518 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 ALPK1Q96QP1 1244 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 FUZQ9BT04 418 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 STX18Q9P2W9 335 aaKnown RBP13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 SLC7A8Q9UHI5 535 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 AURKCQ9UQB9 309 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 UNC79Q9P2D8 2635 aa13.23□□□□□ -0.29
IGHV3-53-201ENST00000390627 CACNA1DQ01668 2161 aa13.22□□□□□ -0.29
IGHV3-53-201ENST00000390627 TRAV27A0A087WT01 109 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms