RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PDLIM1O00151 329 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CACNB4O00305 520 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SIVA1O15304 175 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2T1O43869 369 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CACNG3O60359 315 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RANBP6O60518 1105 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PLIN3O60664 434 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TIMM17BO60830 172 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ERLIN1O75477 346 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LY6HO94772 140 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TPPPO94811 219 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TOMM70O94826 608 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 GLCEO94923 617 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 KCNK2O95069 426 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 KRT75O95678 551 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 HSPA4LO95757 839 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 F10P00742 488 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV1-46P01743 117 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV3-11P01762 117 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ATP5BP06576 529 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 FCER2P06734 321 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CSN3P07498 182 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IFIT1P09914 478 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 OR8U9P0C7N5 309 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 UBTFL6P0CB48 400 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 UROSP10746 265 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ETS1P14921 441 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RPA2P15927 270 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF25P17030 456 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF3P17036 446 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 XRCC1P18887 633 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CYP3A5P20815 502 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PON1P27169 355 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PSMB9P28065 219 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TMOD1P28289 359 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PEBP1P30086 187 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SSTR1P30872 391 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SRD5A2P31213 254 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 HOXD13P35453 343 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 BSGP35613 385 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 HSD17B3P37058 310 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 AKR1C3P42330 323 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC1A2P43004 574 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 HTR5AP47898 357 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TGM4P49221 684 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NPY4RP50391 375 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ASCL1P50553 236 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TUBP50607 506 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF80P51504 273 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CCR4P51679 360 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 XKP51811 444 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NEK2P51955 445 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CCNG1P51959 295 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NCBP2P52298 156 aaKnown RBP eCLIP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 EFNA4P52798 201 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LIMK1P53667 647 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TAS2R31P59538 309 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RPL26P61254 145 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RPL7AP62424 266 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CRADDP78560 199 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TMF1P82094 1093 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CEBPZQ03701 1054 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 REG3AQ06141 175 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CXCL9Q07325 125 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MFGE8Q08431 387 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TFCP2Q12800 502 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 BNIP1Q12981 228 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MAMLD1Q13495 774 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PIN1Q13526 163 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 DMC1Q14565 340 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LAGE3Q14657 143 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MEF2DQ14814 521 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ARL6IP1Q15041 203 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ATP6AP1Q15904 470 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 UAP1Q16222 522 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PSG3Q16557 428 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SNRNP35Q16560 246 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PTGISQ16647 500 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TWISTNBQ3B726 338 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LGALS9BQ3B8N2 356 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF829Q3KNS6 432 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ZBED5Q49AG3 693 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MPPE1Q53F39 396 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 YIF1BQ5BJH7 314 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RNASE13Q5GAN3 156 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SOHLH1Q5JUK2 328 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MLIPQ5VWP3 458 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ATG16L1Q676U5 607 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 C11orf71Q6IPW1 123 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 STEAP1BQ6NZ63 245 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CNSTQ6PJW8 725 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SARM1Q6SZW1 724 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CBLN3Q6UW01 205 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ATRAIDQ6UW56 229 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 Q6ZPB1 254 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 Q6ZQT7 251 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CYP4V2Q6ZWL3 525 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 GET4Q7L5D6 327 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKRD33Q7Z3H0 272 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms