RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 SYNPO2LQ9H987 977 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 BRF2Q9HAW0 419 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 FGF21Q9NSA1 209 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 MED17Q9NVC6 651 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 HPF1Q9NWY4 346 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 SIDT1Q9NXL6 827 aaKnown RBP6.83□□□□□ -1.32
TRBV28-201ENST00000390400 NDUFAF4Q9P032 175 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 MED11Q9P086 117 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 NLKQ9UBE8 527 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 SERTAD3Q9UJW9 196 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 ING1Q9UK53 422 aaPredicted RBP6.83□□□□□ -1.32
TRBV28-201ENST00000390400 FBXL3Q9UKT7 428 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 RARRES3Q9UL19 164 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 COPS3Q9UNS2 423 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 LOXL2Q9Y4K0 774 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 ENPP4Q9Y6X5 453 aa6.83□□□□□ -1.32
TRBV28-201ENST00000390400 URADA6NGE7 173 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 HNRNPCL2B2RXH8 293 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 RNASET2O00584 256 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 P2RX6O15547 441 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 SH3BGRLO75368 114 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 IL5P05113 134 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 HEXAP06865 529 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 ZNF250P15622 560 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 ZNF28P17035 718 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 GSTM3P21266 225 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 AZGP1P25311 298 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 EPHA2P29317 976 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MMP15P51511 669 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 HMGCS1Q01581 520 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MC2RQ01718 297 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 STX4Q12846 297 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 IL18Q14116 193 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 FGFBP1Q14512 234 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 IL11RAQ14626 422 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 GRM7Q14831 915 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 HEPACAMQ14CZ8 416 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 PTGES3Q15185 160 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 FCN2Q15485 313 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MPPED2Q15777 294 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 SNAPC1Q16533 368 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MANEAQ5SRI9 462 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 KHDRBS2Q5VWX1 349 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 HBMQ6B0K9 141 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 TRIM40Q6P9F5 258 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 PAMR1Q6UXH9 720 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 ZNF704Q6ZNC4 412 aaPredicted RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MRGPREQ86SM8 312 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 OAFQ86UD1 273 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 OR6V1Q8N148 313 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 RNF175Q8N4F7 328 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MS4A15Q8N5U1 240 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 SLC5A8Q8N695 610 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 BMPERQ8N8U9 685 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 TEX19Q8NA77 164 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 FAM98AQ8NCA5 519 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 OR4D10Q8NGI6 311 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 OR6M1Q8NGM8 313 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 OR1L3Q8NH93 324 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 CLHC1Q8NHS4 586 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 ZCCHC10Q8TBK6 192 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 RFKQ969G6 155 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MARC2Q969Z3 335 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 DACT3Q96B18 629 aaPredicted RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 INTS12Q96CB8 462 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 ZNF501Q96CX3 271 aaPredicted RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 TM4SF19Q96DZ7 209 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 KCNC2Q96PR1 638 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 OR6C1Q96RD1 312 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 F2RL3Q96RI0 385 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MACROD1Q9BQ69 325 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 SPATA25Q9BR10 227 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 PDCD10Q9BUL8 212 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 TEX12Q9BXU0 123 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 MS4A8Q9BY19 250 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 SPRTNQ9H040 489 aaPredicted RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 POLE3Q9NRF9 147 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 STARD5Q9NSY2 213 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 OCIAD1Q9NX40 245 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 PPP1R14DQ9NXH3 145 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 DLL3Q9NYJ7 618 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 AHSPQ9NZD4 102 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 HCN3Q9P1Z3 774 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 VPS29Q9UBQ0 182 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 PISDQ9UG56 409 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 TESQ9UGI8 421 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 UTS2RQ9UKP6 389 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 RUVBL1Q9Y265 456 aaKnown RBP6.82□□□□□ -1.32
TRBV28-201ENST00000390400 CFAP54Q96N23 3096 aa6.82□□□□□ -1.32
TRBV28-201ENST00000390400 FER1L5A0AVI2 2057 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 SLC22A23A1A5C7 686 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 RAB19A4D1S5 217 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 LRIT2A6NDA9 550 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 SULT1C2O00338 296 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 SAP18O00422 153 aaKnown RBP6.81□□□□□ -1.32
TRBV28-201ENST00000390400 GPR171O14626 319 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 LRRTM2O43300 516 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 ERI3O43414 337 aaKnown RBP6.81□□□□□ -1.32
TRBV28-201ENST00000390400 SELENOFO60613 162 aa6.81□□□□□ -1.32
TRBV28-201ENST00000390400 STX11O75558 287 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms