RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 F3P13726 295 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 CAPZA1P52907 286 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 OR1M1Q8NGA1 313 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 SLC25A32Q9H2D1 315 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
RTF1-201ENST00000389629 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
RTF1-201ENST00000389629 GCM2O75603 506 aaPredicted RBP13.14□□□□□ -0.31
RTF1-201ENST00000389629 NAT2P11245 290 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 GP1BBP13224 206 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 AKR1C3P42330 323 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 C3orf33Q6P1S2 294 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 TTLL10Q6ZVT0 673 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 TSPAN10Q9H1Z9 355 aaPredicted RBP13.14□□□□□ -0.31
RTF1-201ENST00000389629 PPP1R3EQ9H7J1 279 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 ELOVL3Q9HB03 270 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 BCL2L10Q9HD36 194 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 STARD5Q9NSY2 213 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 CBLCQ9ULV8 474 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 KCNIP3Q9Y2W7 256 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 INSL6Q9Y581 213 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 IFITM5A6NNB3 132 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 KDM4EB2RXH2 506 aaPredicted RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 HOXC8P31273 242 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 ZC3HAV1LQ96H79 300 aaKnown RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 CDC6Q99741 560 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 PRTFDC1Q9NRG1 225 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 B4DGG1 531 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 KCNJ13O60928 360 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SEMG1P04279 462 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 S100GP29377 79 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 PRPS1P60891 318 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 NKX6-1P78426 367 aaPredicted RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 DUSP5Q16690 384 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 CST9Q5W186 159 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 ELP5Q8TE02 316 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 INTS14Q96SY0 518 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 TGIF2Q9GZN2 237 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SLC6A17Q9H1V8 727 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SMCO4Q9NRQ5 59 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 TMEM150CB9EJG8 249 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 NTN1O95631 604 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 PMS2P2O95744 297 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 CFDP00746 253 aaPredicted RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 OR2B8PP59922 312 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 TMEM64Q6YI46 380 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 TEX19Q8NA77 164 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 OR52R1Q8NGF1 315 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 RASD2Q96D21 266 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 ZG16BQ96DA0 208 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 A0A1B0GWA3 101 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SULT1B1O43704 296 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 CD3DP04234 171 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SERPINA5P05154 406 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 CSNK2A1P68400 391 aaPredicted RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 OVCH1Q7RTY7 1134 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 ADIPOR2Q86V24 386 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 ZNF761Q86XN6 746 aaPredicted RBP13.13□□□□□ -0.31
RTF1-201ENST00000389629 CSNK2A3Q8NEV1 391 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SAGE1Q9NXZ1 904 aa13.13□□□□□ -0.31
RTF1-201ENST00000389629 SPAG17Q6Q759 2223 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 PEX12O00623 359 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 MAN2B1O00754 1011 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 AGERQ15109 404 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 TMEM71Q6P5X7 295 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 LRRTM1Q86UE6 522 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 PLPP6Q8IY26 295 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 TOMM40LQ969M1 308 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 YIPF5Q969M3 257 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 PEX11GQ96HA9 241 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 SLC17A9Q9BYT1 436 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 TCEAL2Q9H3H9 227 aaPredicted RBP13.12□□□□□ -0.31
RTF1-201ENST00000389629 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 ADAM18Q9Y3Q7 739 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 SCN4AP35499 1836 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 P2RX6O15547 441 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 ADH1BP00325 375 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 C21orf58P58505 322 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 MEF2DQ14814 521 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 GLDNQ6ZMI3 551 aaPredicted RBP13.12□□□□□ -0.31
RTF1-201ENST00000389629 AMER3Q8N944 861 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 C17orf47Q8NEP4 570 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 SSX3Q99909 188 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 EVA1AQ9H8M9 152 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 IL21Q9HBE4 155 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 SLC23A2Q9UGH3 650 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 NDRG3Q9UGV2 375 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 KCND3Q9UK17 655 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 CCDC88CQ9P219 2028 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 MCRIP1C9JLW8 97 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 CTSLP07711 333 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 CEBPBP17676 345 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 RPS27P42677 84 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms