RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SHMT2P34897 504 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 CDKN1CP49918 316 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-203ENST00000381196 RBP2P50120 134 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 FAM3BP58499 235 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-203ENST00000381196 DCAF7P61962 342 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 PRAMEF14Q5SWL7 426 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 LCTLQ6UWM7 567 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 MMP21Q8N119 569 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 PRSS35Q8N3Z0 413 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 ATP5SQ99766 215 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 PTDSS2Q9BVG9 487 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 CHST6Q9GZX3 395 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 ESRP2Q9H6T0 727 aaKnown RBP4.54□□□□□ -1.68
PTPRD-203ENST00000381196 P04436 131 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 ARAFP10398 606 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 NMBRP28336 390 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 CRABP1P29762 137 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 TNFRSF4P43489 277 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 TPPP2P59282 170 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 HBA1P69905 142 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 NR0B2Q15466 257 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 GUK1Q16774 197 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 BCL7AQ4VC05 210 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 OR2W3Q7Z3T1 314 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM151BQ8IW70 566 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 FAM83FQ8NEG4 500 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-203ENST00000381196 OR5H2Q8NGV7 314 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 OR51A7Q8NH64 312 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 SCAMP5Q8TAC9 235 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 IFI44Q8TCB0 444 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 NUDCD2Q8WVJ2 157 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 SPRYD4Q8WW59 207 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-203ENST00000381196 HOXB13Q92826 284 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-203ENST00000381196 FGGYQ96C11 551 aa4.54□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM184BQ9Y519 407 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-203ENST00000381196 SCGB1D2O95969 90 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF35P13682 527 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 GABRB1P18505 474 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF674Q2M3X9 581 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM244Q5VVB8 128 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 C1QL4Q86Z23 238 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 CLIP4Q8N3C7 705 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 GALNT16Q8N428 558 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 RASD2Q96D21 266 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 UHRF2Q96PU4 802 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 HERPUD2Q9BSE4 406 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 SIT1Q9Y3P8 196 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 MFSD2BA6NFX1 497 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 E7EQ34 232 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 GPR171O14626 319 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 GOSR2O14653 212 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 TPST2O60704 377 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ACSM4P0C7M7 580 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 EN2P19622 333 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-203ENST00000381196 NCBP2P52298 156 aaKnown RBP eCLIP4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ERVFC1P60507 584 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ERVK-25P63136 954 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 MS4A2Q01362 244 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 CTBSQ01459 385 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ENPP2Q13822 863 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ELAVL3Q14576 367 aaKnown RBP4.53□□□□□ -1.68
PTPRD-203ENST00000381196 XAF1Q6GPH4 301 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 FAM217AQ8IXS0 508 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 DCAF4L2Q8NA75 395 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 OR5L2Q8NGL0 311 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 HHIPL1Q96JK4 782 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ATF6BQ99941 703 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 C14orf119Q9NWQ9 140 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 HIF3AQ9Y2N7 669 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 PTPRQQ9UMZ3 2332 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 LOC100289279A0A1B0GTE1 492 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 TCRBV5S2A0A599 114 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 DOK2O60496 412 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 LILRB3O75022 631 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 S1PR4O95977 384 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 EPXP11678 715 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 EDNRAP25101 427 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ALDH3B1P43353 468 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 RABIFP47224 123 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 POU3F4P49335 361 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 RAB11AP62491 216 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 EXOSC2Q13868 293 aaKnown RBP4.53□□□□□ -1.68
PTPRD-203ENST00000381196 GINS1Q14691 196 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 FAM209AQ5JX71 171 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM150AQ86TG1 271 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 MISPQ8IVT2 679 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 CLEC1AQ8NC01 280 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ZFPM2Q8WW38 1151 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 MIB2Q96AX9 1013 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 INTS12Q96CB8 462 aaKnown RBP4.53□□□□□ -1.68
PTPRD-203ENST00000381196 SENP5Q96HI0 755 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-203ENST00000381196 PMCHL2Q9BQD1 86 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 SLC12A9Q9BXP2 914 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 ANGPTL4Q9BY76 406 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 B3GNT4Q9C0J1 378 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 MTHFD2LQ9H903 347 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-203ENST00000381196 RPS10P5Q9NQ39 176 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 PISDQ9UG56 409 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 PITPNC1Q9UKF7 332 aa4.53□□□□□ -1.68
PTPRD-203ENST00000381196 RAB22AQ9UL26 194 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms