RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 LPCAT4Q643R3 524 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 VWA1Q6PCB0 445 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 CLDN22Q8N7P3 220 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 CNEP1R1Q8N9A8 125 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 OR8D4Q8NGM9 314 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 EME1Q96AY2 570 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 SLC29A1Q99808 456 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 PAPOLBQ9NRJ5 636 aaKnown RBP16.68■□□□□ 0.26
SMN2-202ENST00000380742 MED29Q9NX70 200 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 IL20Q9NYY1 176 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 ERRFI1Q9UJM3 462 aaPredicted RBP16.68■□□□□ 0.26
SMN2-202ENST00000380742 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 NOSIPQ9Y314 301 aaKnown RBP16.68■□□□□ 0.26
SMN2-202ENST00000380742 CDH10Q9Y6N8 788 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 UBR5O95071 2799 aaPredicted RBP16.68■□□□□ 0.26
SMN2-202ENST00000380742 ALPK2Q86TB3 2170 aa16.68■□□□□ 0.26
SMN2-202ENST00000380742 DIDO1Q9BTC0 2240 aaKnown RBP16.67■□□□□ 0.26
SMN2-202ENST00000380742 ATP6V1G2O95670 118 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 IFNGR1P15260 489 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 EDNRAP25101 427 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 RPL4P36578 427 aaKnown RBP16.67■□□□□ 0.26
SMN2-202ENST00000380742 CLDN17P56750 224 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 SLC35D2Q76EJ3 337 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 GALNT5Q7Z7M9 940 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 LIX1LQ8IVB5 337 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 DNAJC9Q8WXX5 260 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 TMEM45BQ96B21 275 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 STARD4Q96DR4 205 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 GPX7Q96SL4 187 aaPredicted RBP16.67■□□□□ 0.26
SMN2-202ENST00000380742 RBM4BQ9BQ04 359 aaKnown RBP16.67■□□□□ 0.26
SMN2-202ENST00000380742 TACO1Q9BSH4 297 aaKnown RBP16.67■□□□□ 0.26
SMN2-202ENST00000380742 KATNB1Q9BVA0 655 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 RBM4Q9BWF3 364 aaKnown RBP16.67■□□□□ 0.26
SMN2-202ENST00000380742 C12orf49Q9H741 205 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 KRT84Q9NSB2 600 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 USE1Q9NZ43 259 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 SLC5A6Q9Y289 635 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 POFUT2Q9Y2G5 429 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 EMC9Q9Y3B6 208 aa16.67■□□□□ 0.26
SMN2-202ENST00000380742 A0A1W2PRG6 482 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 CASQ2O14958 399 aaPredicted RBP16.66■□□□□ 0.26
SMN2-202ENST00000380742 ZNF432O94892 652 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 IGHMP01871 453 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 ALPLP05186 524 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 CD14P08571 375 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 OSMP13725 252 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 PEX2P28328 305 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 ERVK-25P63136 954 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 MELKQ14680 651 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 ACKR1Q16570 336 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 LRRC36Q1X8D7 754 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 SLC36A3Q495N2 470 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 RPL13AP3Q6NVV1 102 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 ZBTB49Q6ZSB9 765 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 AAED1Q7RTV5 226 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.66■□□□□ 0.26
SMN2-202ENST00000380742 BTLAQ7Z6A9 289 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 OR6K3Q8NGY3 331 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 MAGEE2Q8TD90 523 aaPredicted RBP16.66■□□□□ 0.26
SMN2-202ENST00000380742 TSPAN32Q96QS1 320 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 EMC6Q9BV81 110 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 SFXN3Q9BWM7 321 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 NRIP3Q9NQ35 241 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 ADAM18Q9Y3Q7 739 aa16.66■□□□□ 0.26
SMN2-202ENST00000380742 SLC35F4A4IF30 521 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 PPP1R3DO95685 299 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 IL18BPO95998 194 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 CGAP01215 116 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 IGFBP5P24593 272 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 SLC6A6P31641 620 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 OPRM1P35372 400 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 SELENOPP49908 381 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 ALDH3A2P51648 485 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 BIDP55957 195 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 TAF11Q15544 211 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 CLEC12AQ5QGZ9 265 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 OGFRL1Q5TC84 451 aaPredicted RBP16.65■□□□□ 0.26
SMN2-202ENST00000380742 MTFR2Q6P444 385 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 DPY19L2P2Q6ZN68 376 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 FAM122BQ7Z309 247 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 PARP8Q8N3A8 854 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 ASB10Q8WXI3 467 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 POLDIP3Q9BY77 421 aaKnown RBP16.65■□□□□ 0.26
SMN2-202ENST00000380742 TXNIPQ9H3M7 391 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 TBC1D23Q9NUY8 699 aa16.65■□□□□ 0.26
SMN2-202ENST00000380742 ZNF629Q9UEG4 869 aaPredicted RBP16.65■□□□□ 0.26
SMN2-202ENST00000380742 ZNF346Q9UL40 294 aaKnown RBP16.65■□□□□ 0.26
SMN2-202ENST00000380742 NPIPB13A6NJU9 1138 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 NPIPB4C9JG80 1138 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 H3BN98 237 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 J3QKU1 62 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 MRPL33O75394 65 aaKnown RBP16.64■□□□□ 0.26
SMN2-202ENST00000380742 BCL10O95999 233 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 BMP5P22003 454 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 RPL27P61353 136 aaKnown RBP16.64■□□□□ 0.26
SMN2-202ENST00000380742 TOP3AQ13472 1001 aaPredicted RBP16.64■□□□□ 0.26
SMN2-202ENST00000380742 ARMC4Q5T2S8 1044 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 NIPAL3Q6P499 406 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 CASP12Q6UXS9 341 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 NRG4Q8WWG1 115 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms