RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 DVL1O14640 695 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 PLRG1O43660 514 aaKnown RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 CLDN11O75508 207 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 LRATO95237 230 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 GOSR1O95249 250 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR2C1O95371 312 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 LRG1P02750 347 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 PPBPP02775 128 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 HOXC8P31273 242 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 SEC13P55735 322 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 BTG2P78543 158 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 EFNB1P98172 346 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 PRAMEF20Q5VT98 475 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 CLEC20AQ6ZU45 233 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 SCD5Q86SK9 330 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 SERPINA11Q86U17 422 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR4F15Q8NGB8 312 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR4E2Q8NGC2 313 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 HAVCR2Q8TDQ0 301 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 SECTM1Q8WVN6 248 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 ARSGQ96EG1 525 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 SMAD5Q99717 465 aaKnown RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 MICU1Q9BPX6 476 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 COMMD9Q9P000 198 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 EYSQ5T1H1 3165 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 GBF1Q92538 1859 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 SLC5A10A0PJK1 596 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 C22orf46C9J442 243 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 SCGNO76038 276 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF432O94892 652 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 RPP14O95059 124 aaKnown RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 KCNK5O95279 499 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 GASTP01350 101 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 OPN1SWP03999 348 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ANXA5P08758 320 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 MMP7P09237 267 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 RASGEF1BQ0VAM2 473 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TSPAN31Q12999 210 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF345Q14585 488 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TAF13Q15543 124 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 PTPRNQ16849 979 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 LRIF1Q5T3J3 769 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 BTNL3Q6UXE8 466 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ERN2Q76MJ5 926 aaKnown RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 GPRIN1Q7Z2K8 1008 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TSEN54Q7Z6J9 526 aaKnown RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 MUC20Q8N307 709 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 RGP1Q92546 391 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 V9GYS6 101 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 PCDH7O60245 1069 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 NAA10P41227 235 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 HMGN3Q15651 99 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 UBE2V2Q15819 145 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 OR8G2PQ6IF36 304 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 KIRREL2Q6UWL6 708 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 C1orf122Q6ZSJ8 110 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 CD163Q86VB7 1156 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TMEM40Q8WWA1 233 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 HLA-CQ95604 372 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 DOHHQ9BU89 302 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 DERL2Q9GZP9 239 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 PCBD2Q9H0N5 130 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 MYOTQ9UBF9 498 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF230Q9UIE0 474 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 KCNG2Q9UJ96 466 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TNFSF18Q9UNG2 199 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 SLCO1B1Q9Y6L6 691 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ALPK3Q96L96 1907 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 CEP290O15078 2479 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ANKRD20A5PA0PJZ0 165 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TRDCB7Z8K6 153 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 FAM227AF5H4B4 570 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 J3KTA2 159 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 GJB3O75712 270 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TPT1P13693 172 aaKnown RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TYRP1P17643 537 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 PSEN2P49810 448 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 RENBPP51606 427 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ERVPABLB-1P60509 514 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 VAMP2P63027 116 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF616Q08AN1 781 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 XKR6Q5GH73 641 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 C9orf57Q5W0N0 161 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 WSCD1Q658N2 575 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ACOT7LQ6ZUV0 252 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 TMPRSS7Q7RTY8 843 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 GPSM1Q86YR5 675 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 NTNG2Q96CW9 530 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 NKX3-1Q99801 234 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 RIOK2Q9BVS4 552 aaKnown RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 CLMPQ9H6B4 373 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 NMNAT1Q9HAN9 279 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 THSD1Q9NS62 852 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 PCTPQ9UKL6 214 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 EXOGQ9Y2C4 368 aaKnown RBP8.6□□□□□ -1.03
PTPRA-204ENST00000380393 ZFP30Q9Y2G7 519 aa8.6□□□□□ -1.03
PTPRA-204ENST00000380393 K7EP13 123 aa8.59□□□□□ -1.03
PTPRA-204ENST00000380393 AQP7O14520 342 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms