RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TMEM91Q6ZNR0 172 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 OR2T4Q8NH00 348 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 FRMD6Q96NE9 622 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 MED18Q9BUE0 208 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 TXNIPQ9H3M7 391 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 CCDC86Q9H6F5 360 aaKnown RBP17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 B3GNT3Q9Y2A9 372 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 PCSK5Q92824 1860 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 XKRYO14609 159 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 TFPIP10646 304 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 TAS2R43P59537 309 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 ACTA2P62736 377 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 ACTG2P63267 376 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 CDONQ4KMG0 1287 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 MARCH9Q86YJ5 346 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 PM20D2Q8IYS1 436 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 KDM8Q8N371 416 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 TMEM156Q8N614 296 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 FADS6Q8N9I5 356 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 SNX33Q8WV41 574 aa17.89■□□□□ 0.45
PDLIM5-205ENST00000380180 MS4A18H0YCH9 400 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 GALP22466 123 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 CAPZA2P47755 286 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 MAP2K6P52564 334 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 RPS15P62841 145 aaKnown RBP17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 FOXK1P85037 733 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 Q0VFX4 171 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 MS4A18Q3C1V0 323 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 GLYR1Q49A26 553 aaPredicted RBP17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 TMEM164Q5U3C3 297 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 TMEM81Q6P7N7 255 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 ARMC10Q8N2F6 343 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 SYS1Q8N2H4 156 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 OR4K17Q8NGC6 315 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 ZNF519Q8TB69 540 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 FNDC8Q8TC99 324 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 THAP4Q8WY91 577 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 NXPE2Q96DL1 559 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 PELI1Q96FA3 418 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 NCDNQ9UBB6 729 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 CRNNQ9UBG3 495 aaPredicted RBP17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 GRIP1Q9Y3R0 1128 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 PCDHGA1Q9Y5H4 931 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 CACNA1CQ13936 2221 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 OTOGLQ3ZCN5 2332 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 DVL2O14641 736 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 CCL3P10147 92 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 IMPDH2P12268 514 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 ICAM2P13598 275 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 SLC3A1Q07837 685 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 MFSD13AQ14CX5 517 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 EEF1A1P5Q5VTE0 462 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 OR5M1Q8NGP8 315 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 POTEKPQ9BYX7 375 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 PTGES2Q9H7Z7 377 aa17.88■□□□□ 0.45
PDLIM5-205ENST00000380180 RGS9O75916 674 aaPredicted RBP17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 GAAP10253 952 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 HLA-DOBP13765 273 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 GTF2E2P29084 291 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 PPP5CP53041 499 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 RUNX1T1Q06455 604 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 PUDPQ08623 228 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 HNRNPA0Q13151 305 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 EIF3IQ13347 325 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 HES3Q5TGS1 186 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 H1FNTQ75WM6 255 aaPredicted RBP17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 SLC16A9Q7RTY1 509 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 SNX29P2Q8IUI4 249 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 TIGD4Q8IY51 512 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 ZNF248Q8NDW4 579 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 NEIL3Q8TAT5 605 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 ANGPTL4Q9BY76 406 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 PROK2Q9HC23 129 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 SMURF1Q9HCE7 757 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 SERINC1Q9NRX5 453 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 GNG8Q9UK08 70 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 POLHQ9Y253 713 aa17.87■□□□□ 0.45
PDLIM5-205ENST00000380180 SMIM30A4D0T7 59 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 PRSS37A4D1T9 235 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 TVP23AA6NH52 213 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 HPP00738 406 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 IGHMP01871 453 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 CD53P19397 219 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 F8A1P23610 371 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 SLC22A10Q63ZE4 541 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 DMKNQ6E0U4 476 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 SCAIQ8N9R8 606 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 PAQR8Q8TEZ7 354 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 SH2D2AQ9NP31 389 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 HPF1Q9NWY4 346 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 PLEKHB1Q9UF11 243 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 ST6GALNAC2Q9UJ37 374 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 CNTRLQ7Z7A1 2325 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 A0A1W2PRG6 482 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 SHISA3A0PJX4 238 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 LIPT2A6NK58 231 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 FAM47E-STBD1D6RA91 191 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 TAF4O00268 1085 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 TRIM3O75382 744 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 OPN1LWP04000 364 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms